RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 JMJD8Q96S16 334 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 PBDC1Q9BVG4 233 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 DOK5Q9P104 306 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 FUT9Q9Y231 359 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 HYPMO75409 117 aa14□□□□□ -0.17
VRK3-225ENST00000601912 CLEC3BP05452 202 aa14□□□□□ -0.17
VRK3-225ENST00000601912 ORM2P19652 201 aa14□□□□□ -0.17
VRK3-225ENST00000601912 GPR183P32249 361 aa14□□□□□ -0.17
VRK3-225ENST00000601912 RAB9AP51151 201 aa14□□□□□ -0.17
VRK3-225ENST00000601912 PLP1P60201 277 aa14□□□□□ -0.17
VRK3-225ENST00000601912 CCL20P78556 96 aa14□□□□□ -0.17
VRK3-225ENST00000601912 UQCC3Q6UW78 93 aa14□□□□□ -0.17
VRK3-225ENST00000601912 ZNF329Q86UD4 541 aa14□□□□□ -0.17
VRK3-225ENST00000601912 OR51G1Q8NGK1 321 aa14□□□□□ -0.17
VRK3-225ENST00000601912 OR1B1Q8NGR6 318 aa14□□□□□ -0.17
VRK3-225ENST00000601912 Q8WTZ3 238 aa14□□□□□ -0.17
VRK3-225ENST00000601912 TMEM37Q8WXS4 190 aa14□□□□□ -0.17
VRK3-225ENST00000601912 MRPL32Q9BYC8 188 aaKnown RBP14□□□□□ -0.17
VRK3-225ENST00000601912 PSMB11A5LHX3 300 aa13.99□□□□□ -0.17
VRK3-225ENST00000601912 INAFM1C9JVW0 142 aa13.99□□□□□ -0.17
VRK3-225ENST00000601912 EIF3GO75821 320 aaKnown RBP eCLIP13.99□□□□□ -0.17
VRK3-225ENST00000601912 RNASE1P07998 156 aaKnown RBP13.99□□□□□ -0.17
VRK3-225ENST00000601912 CTSGP08311 255 aa13.99□□□□□ -0.17
VRK3-225ENST00000601912 TAS2R45P59539 299 aa13.99□□□□□ -0.17
VRK3-225ENST00000601912 HILS1P60008 231 aa13.99□□□□□ -0.17
VRK3-225ENST00000601912 TEX38Q6PEX7 206 aa13.99□□□□□ -0.17
VRK3-225ENST00000601912 CLEC19AQ6UXS0 136 aa13.99□□□□□ -0.17
VRK3-225ENST00000601912 KLK15Q9H2R5 256 aa13.99□□□□□ -0.17
VRK3-225ENST00000601912 CXorf1O96002 111 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 STAG3L2P0CL84 134 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 STAG3L3P0CL85 134 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 PSMB8P28062 276 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 LYZP61626 148 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 CCDC140Q96MF4 163 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 FAM210AQ96ND0 272 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 EIF5A2Q9GZV4 153 aaKnown RBP13.98□□□□□ -0.17
VRK3-225ENST00000601912 TECRQ9NZ01 308 aaKnown RBP13.98□□□□□ -0.17
VRK3-225ENST00000601912 MTORP42345 2549 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 S100A1P23297 94 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 GUK1Q16774 197 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 PATE2Q6UY27 113 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 MIR17HGQ75NE6 70 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 IQCF2Q8IXL9 164 aa13.98□□□□□ -0.17
VRK3-225ENST00000601912 TGOLN2O43493 480 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 IFNA1P01562 189 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 ELANEP08246 267 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 FOXE3Q13461 319 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 SPATA31B1PQ5VZV4 182 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 LINC00305Q7Z4B0 112 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 S100A7AQ86SG5 101 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 CHRDL1Q9BU40 450 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 GNB4Q9HAV0 340 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 SERTAD4Q9NUC0 356 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 GNG13Q9P2W3 67 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 HIGD1AQ9Y241 93 aa13.97□□□□□ -0.17
VRK3-225ENST00000601912 ANK3Q12955 4377 aaKnown RBP13.96□□□□□ -0.17
VRK3-225ENST00000601912 OR2C1O95371 312 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 IL4P05112 153 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 ARL14EPLP0DKL9 152 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 C8orf88P0DMB2 117 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 ADMP35318 185 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 PSMB3P49720 205 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 PPT1P50897 306 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 PMS2P11Q13670 270 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 PEA15Q15121 130 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 KHDC3LQ587J8 217 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 ZNF600Q6ZNG1 722 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 Q6ZSV7 163 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 ZNF491Q8N8L2 437 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 RNF125Q96EQ8 232 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 TREM1Q9NP99 234 aa13.96□□□□□ -0.17
VRK3-225ENST00000601912 WI2-2373I1.2A0A1W2PRP0 233 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 RBFOX3A6NFN3 312 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 I3L521 148 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 RELQ04864 619 aaPredicted RBP13.95□□□□□ -0.18
VRK3-225ENST00000601912 TOR2AQ5JU69 321 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 FAM209BQ5JX69 171 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 PQLC2Q6ZP29 291 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 UHRF2Q96PU4 802 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.95□□□□□ -0.18
VRK3-225ENST00000601912 HAGHQ16775 308 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 LCNL1Q6ZST4 164 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 NARS2Q96I59 477 aaKnown RBP13.95□□□□□ -0.18
VRK3-225ENST00000601912 TMPRSS5Q9H3S3 457 aa13.95□□□□□ -0.18
VRK3-225ENST00000601912 PUS1Q9Y606 427 aaKnown RBP eCLIP13.95□□□□□ -0.18
VRK3-225ENST00000601912 HIVEP1P15822 2718 aa13.94□□□□□ -0.18
VRK3-225ENST00000601912 IGHV3-11P01762 117 aa13.94□□□□□ -0.18
VRK3-225ENST00000601912 CD5P06127 495 aa13.94□□□□□ -0.18
VRK3-225ENST00000601912 TAGLN2P37802 199 aaKnown RBP13.94□□□□□ -0.18
VRK3-225ENST00000601912 SRSF3P84103 164 aaKnown RBP13.94□□□□□ -0.18
VRK3-225ENST00000601912 ZNF343Q6P1L6 599 aa13.94□□□□□ -0.18
VRK3-225ENST00000601912 C10orf99Q6UWK7 81 aa13.94□□□□□ -0.18
VRK3-225ENST00000601912 OR4X2Q8NGF9 303 aa13.94□□□□□ -0.18
VRK3-225ENST00000601912 SMDT1Q9H4I9 107 aa13.94□□□□□ -0.18
VRK3-225ENST00000601912 TMEM231Q9H6L2 316 aa13.94□□□□□ -0.18
VRK3-225ENST00000601912 MANBALQ9NQG1 85 aa13.94□□□□□ -0.18
VRK3-225ENST00000601912 MRPL27Q9P0M9 148 aaKnown RBP13.94□□□□□ -0.18
VRK3-225ENST00000601912 OR7C2O60412 319 aa13.93□□□□□ -0.18
VRK3-225ENST00000601912 GCHFRP30047 84 aa13.93□□□□□ -0.18
VRK3-225ENST00000601912 S100A7P31151 101 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms