RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 PUS1Q9Y606 427 aaKnown RBP eCLIP17.58■□□□□ 0.4
IRF3-227ENST00000600911 PXMP4Q9Y6I8 212 aa17.58■□□□□ 0.4
IRF3-227ENST00000600911 WNK1Q9H4A3 2382 aa17.57■□□□□ 0.4
IRF3-227ENST00000600911 COL6A5A8TX70 2615 aa17.57■□□□□ 0.4
IRF3-227ENST00000600911 MPDU1O75352 247 aa17.57■□□□□ 0.4
IRF3-227ENST00000600911 HSPB1P04792 205 aaKnown RBP17.57■□□□□ 0.4
IRF3-227ENST00000600911 YPEL3P61236 119 aaPredicted RBP17.57■□□□□ 0.4
IRF3-227ENST00000600911 SPSB3Q6PJ21 355 aa17.57■□□□□ 0.4
IRF3-227ENST00000600911 STAB1Q9NY15 2570 aa17.56■□□□□ 0.4
IRF3-227ENST00000600911 EIF3GO75821 320 aaKnown RBP eCLIP17.56■□□□□ 0.4
IRF3-227ENST00000600911 SPP1P10451 314 aa17.56■□□□□ 0.4
IRF3-227ENST00000600911 RPL29P47914 159 aaKnown RBP17.56■□□□□ 0.4
IRF3-227ENST00000600911 ZNF616Q08AN1 781 aa17.56■□□□□ 0.4
IRF3-227ENST00000600911 USF2Q15853 346 aaPredicted RBP17.56■□□□□ 0.4
IRF3-227ENST00000600911 TOMM20LQ6UXN7 152 aa17.56■□□□□ 0.4
IRF3-227ENST00000600911 DOK5Q9P104 306 aa17.56■□□□□ 0.4
IRF3-227ENST00000600911 GGCTO75223 188 aaKnown RBP17.55■□□□□ 0.4
IRF3-227ENST00000600911 RD3LP0DJH9 198 aa17.55■□□□□ 0.4
IRF3-227ENST00000600911 TPT1P13693 172 aaKnown RBP17.55■□□□□ 0.4
IRF3-227ENST00000600911 HOXD3P31249 432 aaPredicted RBP17.55■□□□□ 0.4
IRF3-227ENST00000600911 ELLP55199 621 aaPredicted RBP17.55■□□□□ 0.4
IRF3-227ENST00000600911 PATE2Q6UY27 113 aa17.55■□□□□ 0.4
IRF3-227ENST00000600911 NDUFA11Q86Y39 141 aa17.55■□□□□ 0.4
IRF3-227ENST00000600911 OR1N2Q8NGR9 330 aa17.55■□□□□ 0.4
IRF3-227ENST00000600911 TMED6Q8WW62 240 aa17.55■□□□□ 0.4
IRF3-227ENST00000600911 SLC39A9Q9NUM3 307 aa17.55■□□□□ 0.4
IRF3-227ENST00000600911 WI2-2373I1.2A0A1W2PRP0 233 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 B2MP61769 119 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 FHL3Q13643 280 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 ZNF600Q6ZNG1 722 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 OR51G1Q8NGK1 321 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 GAR1Q9NY12 217 aaKnown RBP17.54■□□□□ 0.4
IRF3-227ENST00000600911 TRRAPQ9Y4A5 3859 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 LINC01619G3V211 115 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 ZNF207O43670 478 aaKnown RBP17.54■□□□□ 0.4
IRF3-227ENST00000600911 IL4P05112 153 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 FAM209BQ5JX69 171 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 FFAR4Q5NUL3 377 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 SPATA3Q8NHX4 192 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 TMEM37Q8WXS4 190 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 PSMG3Q9BT73 122 aaPredicted RBP17.54■□□□□ 0.4
IRF3-227ENST00000600911 TIMM9Q9Y5J7 89 aa17.54■□□□□ 0.4
IRF3-227ENST00000600911 LYZP61626 148 aa17.53■□□□□ 0.4
IRF3-227ENST00000600911 IFITM2Q01629 132 aa17.53■□□□□ 0.4
IRF3-227ENST00000600911 FAM74A1Q5RGS3 127 aa17.53■□□□□ 0.4
IRF3-227ENST00000600911 ALKAL2Q6UX46 152 aa17.53■□□□□ 0.4
IRF3-227ENST00000600911 OR2G3Q8NGZ4 309 aa17.53■□□□□ 0.4
IRF3-227ENST00000600911 ZNF747Q9BV97 191 aa17.53■□□□□ 0.4
IRF3-227ENST00000600911 CCL24O00175 119 aa17.52■□□□□ 0.4
IRF3-227ENST00000600911 RAB2AP61019 212 aa17.52■□□□□ 0.4
IRF3-227ENST00000600911 RPEL1Q2QD12 228 aa17.52■□□□□ 0.4
IRF3-227ENST00000600911 MORN5Q5VZ52 161 aa17.52■□□□□ 0.4
IRF3-227ENST00000600911 C17orf112F2Z3M2 114 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 ORM2P19652 201 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 SYNJ2BPP57105 145 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 RAB31Q13636 194 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 SPATA31B1PQ5VZV4 182 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 C12orf54Q6X4T0 127 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 ZNF709Q8N972 641 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 Q8WTZ3 238 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 DLX4Q92988 240 aaPredicted RBP17.51■□□□□ 0.39
IRF3-227ENST00000600911 GNPNAT1Q96EK6 184 aaPredicted RBP17.51■□□□□ 0.39
IRF3-227ENST00000600911 RNF125Q96EQ8 232 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 UHRF2Q96PU4 802 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 PBDC1Q9BVG4 233 aa17.51■□□□□ 0.39
IRF3-227ENST00000600911 NDUFA4O00483 81 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 TSPAN15O95858 294 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 C4BPBP20851 252 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 SELENOTP62341 195 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 RELQ04864 619 aaPredicted RBP17.5■□□□□ 0.39
IRF3-227ENST00000600911 KLF5Q13887 457 aaPredicted RBP17.5■□□□□ 0.39
IRF3-227ENST00000600911 OR1B1Q8NGR6 318 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 TMEM190Q8WZ59 177 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 VWFP04275 2813 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 APOHP02749 345 aaPredicted RBP17.5■□□□□ 0.39
IRF3-227ENST00000600911 SEC11BP0C7V7 166 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 FHITP49789 147 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 SSX7Q7RTT5 188 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 GPHB5Q86YW7 130 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 C20orf24Q9BUV8 137 aa17.5■□□□□ 0.39
IRF3-227ENST00000600911 ANK2Q01484 3957 aa17.49■□□□□ 0.39
IRF3-227ENST00000600911 IGHV3-49A0A0A0MS15 119 aa17.49■□□□□ 0.39
IRF3-227ENST00000600911 PLP1P60201 277 aa17.49■□□□□ 0.39
IRF3-227ENST00000600911 TM4SF20Q53R12 229 aa17.49■□□□□ 0.39
IRF3-227ENST00000600911 DPF1Q92782 380 aa17.49■□□□□ 0.39
IRF3-227ENST00000600911 RPRMQ9NS64 109 aa17.49■□□□□ 0.39
IRF3-227ENST00000600911 MRPL27Q9P0M9 148 aaKnown RBP17.49■□□□□ 0.39
IRF3-227ENST00000600911 SELENOKQ9Y6D0 94 aa17.49■□□□□ 0.39
IRF3-227ENST00000600911 ZNF320A2RRD8 509 aa17.48■□□□□ 0.39
IRF3-227ENST00000600911 C3orf56Q8N813 242 aa17.48■□□□□ 0.39
IRF3-227ENST00000600911 IGHV3OR16-13A0A075B7E8 117 aa17.47■□□□□ 0.39
IRF3-227ENST00000600911 IGHV3-74A0A0B4J1X5 117 aa17.47■□□□□ 0.39
IRF3-227ENST00000600911 EIF5AP63241 154 aaKnown RBP17.47■□□□□ 0.39
IRF3-227ENST00000600911 ZNF726P1Q15940 193 aa17.47■□□□□ 0.39
IRF3-227ENST00000600911 TEX261Q6UWH6 196 aa17.47■□□□□ 0.39
IRF3-227ENST00000600911 SEPSECSQ9HD40 501 aaKnown RBP17.47■□□□□ 0.39
IRF3-227ENST00000600911 OR5G3P0C626 314 aa17.47■□□□□ 0.39
IRF3-227ENST00000600911 LEMD1Q68G75 181 aa17.47■□□□□ 0.39
IRF3-227ENST00000600911 ADAMTSL5Q6ZMM2 481 aa17.47■□□□□ 0.39
IRF3-227ENST00000600911 RPP25LQ8N5L8 163 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 352 ms