RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 UBE2CO00762 179 aa13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 IFNA21P01568 189 aa13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 TCRBP04435 133 aa13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 POLR2GP62487 172 aaKnown RBP eCLIP13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 OR51G1Q8NGK1 321 aa13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 NARS2Q96I59 477 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 SLC35E1Q96K37 410 aa13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 PAIP2BQ9ULR5 123 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 ZFP92A6NM28 416 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 BUB3O43684 328 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 DEFB131AP59861 70 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 RPP30P78346 268 aaKnown RBP13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 SPANXN5Q5MJ07 72 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 ZFAND6Q6FIF0 208 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 STXBP6Q8NFX7 210 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 DCANP1Q8TF63 244 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 GRAMD2BQ96HH9 432 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 RABAC1Q9UI14 185 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 TP53TG1Q9Y2A0 90 aa13.62□□□□□ -0.23
SHKBP1-202ENST00000593764 H3BP45 60 aa13.61□□□□□ -0.23
SHKBP1-202ENST00000593764 NKX2-1P43699 371 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-202ENST00000593764 DEFB135Q30KP9 77 aa13.61□□□□□ -0.23
SHKBP1-202ENST00000593764 LEMD1Q68G75 181 aa13.61□□□□□ -0.23
SHKBP1-202ENST00000593764 STPG3Q8N7X2 389 aa13.61□□□□□ -0.23
SHKBP1-202ENST00000593764 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
SHKBP1-202ENST00000593764 RNF125Q96EQ8 232 aa13.61□□□□□ -0.23
SHKBP1-202ENST00000593764 TRGV9Q99603 122 aa13.61□□□□□ -0.23
SHKBP1-202ENST00000593764 TRAV6A0A075B6T7 132 aa13.6□□□□□ -0.23
SHKBP1-202ENST00000593764 SPRY2O43597 315 aa13.6□□□□□ -0.23
SHKBP1-202ENST00000593764 PAX9P55771 341 aa13.6□□□□□ -0.23
SHKBP1-202ENST00000593764 S100ZQ8WXG8 99 aa13.6□□□□□ -0.23
SHKBP1-202ENST00000593764 RNF183Q96D59 192 aa13.6□□□□□ -0.23
SHKBP1-202ENST00000593764 TENM2Q9NT68 2774 aa13.6□□□□□ -0.23
SHKBP1-202ENST00000593764 NUDT15Q9NV35 164 aa13.6□□□□□ -0.23
SHKBP1-202ENST00000593764 TBC1D24Q9ULP9 559 aa13.6□□□□□ -0.23
SHKBP1-202ENST00000593764 STRAPQ9Y3F4 350 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-202ENST00000593764 AGRNO00468 2067 aa13.59□□□□□ -0.23
SHKBP1-202ENST00000593764 HELTA6NFD8 242 aa13.59□□□□□ -0.23
SHKBP1-202ENST00000593764 EIF2B2P49770 351 aaKnown RBP13.59□□□□□ -0.23
SHKBP1-202ENST00000593764 IAH1Q2TAA2 248 aaPredicted RBP13.59□□□□□ -0.23
SHKBP1-202ENST00000593764 SMIM8Q96KF7 97 aa13.59□□□□□ -0.23
SHKBP1-202ENST00000593764 CSTL1Q9H114 145 aa13.59□□□□□ -0.23
SHKBP1-202ENST00000593764 PSENENQ9NZ42 101 aa13.59□□□□□ -0.23
SHKBP1-202ENST00000593764 LYSTQ99698 3801 aa13.59□□□□□ -0.23
SHKBP1-202ENST00000593764 SACSQ9NZJ4 4579 aa13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 PMS2P5A8MQ11 134 aa13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 SNRPGP15A8MWD9 76 aa13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 SSSCA1O60232 199 aa13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 ZNF688P0C7X2 276 aa13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 AP2S1P53680 142 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 OR2F1Q13607 317 aa13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 OR8G2PQ6IF36 304 aa13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 ZBTB8BQ8NAP8 495 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 PBDC1Q9BVG4 233 aa13.58□□□□□ -0.24
SHKBP1-202ENST00000593764 SEC22CQ9BRL7 303 aa13.57□□□□□ -0.24
SHKBP1-202ENST00000593764 GSKIPQ9P0R6 139 aa13.57□□□□□ -0.24
SHKBP1-202ENST00000593764 CCSO14618 274 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 CCNKO75909 580 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 FABP1P07148 127 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 H2AFB2P0C5Z0 115 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 LYZP61626 148 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 ASAH1Q13510 395 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 TMEM14EPQ6UXP3 125 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 SIGLEC15Q6ZMC9 328 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 TMEM182Q6ZP80 229 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 ACOT7LQ6ZUV0 252 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 ZNF431Q8TF32 576 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 PTTG2Q9NZH5 202 aa13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 RCL1Q9Y2P8 373 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-202ENST00000593764 FAM240BA0A1B0GVZ2 78 aa13.55□□□□□ -0.24
SHKBP1-202ENST00000593764 MBPP02686 304 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-202ENST00000593764 TMEM144Q7Z5S9 345 aa13.55□□□□□ -0.24
SHKBP1-202ENST00000593764 RAB40CQ96S21 281 aa13.55□□□□□ -0.24
SHKBP1-202ENST00000593764 NRN1Q9NPD7 142 aa13.55□□□□□ -0.24
SHKBP1-202ENST00000593764 A0A0J9YWU9 116 aa13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 KNCNA6PVL3 124 aa13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 SCGB1D2O95969 90 aa13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 GATA2P23769 480 aaPredicted RBP13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 NUP62P37198 522 aaPredicted RBP13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 TAS2R30P59541 319 aa13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 IFITM3Q01628 133 aa13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 EWSR1Q01844 656 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 C1orf194Q5T5A4 169 aa13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 TRPT1Q86TN4 253 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 STHQ8IWL8 128 aa13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 IL17DQ8TAD2 202 aa13.54□□□□□ -0.24
SHKBP1-202ENST00000593764 C7orf66A4D0T2 115 aa13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 UPK1BO75841 260 aa13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 CFDP00746 253 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 GIG44P09565 113 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 METTL15P1P0C7V9 234 aa13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 AKR1C1Q04828 323 aa13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 ZNF846Q147U1 533 aa13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 PSMG4Q5JS54 123 aa13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 MZT2BQ6NZ67 158 aa13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 C12orf45Q8N5I9 185 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 WDR12Q9GZL7 423 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 SEPSECSQ9HD40 501 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 PFDN2Q9UHV9 154 aa13.53□□□□□ -0.24
SHKBP1-202ENST00000593764 TSC22D2O75157 780 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms