RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 TRGV9Q99603 122 aa9.21□□□□□ -0.94
SEH1L-208ENST00000590843 PKDREJQ9NTG1 2253 aa9.21□□□□□ -0.94
SEH1L-208ENST00000590843 LINC01549A6NIU2 74 aa9.21□□□□□ -0.94
SEH1L-208ENST00000590843 NHLH2Q02577 135 aa9.21□□□□□ -0.94
SEH1L-208ENST00000590843 PHYHIPLQ96FC7 376 aa9.21□□□□□ -0.94
SEH1L-208ENST00000590843 FGF8P55075 233 aaPredicted RBP9.2□□□□□ -0.94
SEH1L-208ENST00000590843 TSTD3H0UI37 97 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 DHRS11Q6UWP2 260 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 ADARB2-AS1A8MUL3 147 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 A8MXK9 166 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 LDLRAD4O15165 306 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 TOMM40O96008 361 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 C1QBP02746 253 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 HOXD3P31249 432 aaPredicted RBP9.2□□□□□ -0.94
SEH1L-208ENST00000590843 ALPK2Q86TB3 2170 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 FCN3O75636 299 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 IGFBP3P17936 291 aaPredicted RBP9.2□□□□□ -0.94
SEH1L-208ENST00000590843 OR10C1Q96KK4 312 aa9.2□□□□□ -0.94
SEH1L-208ENST00000590843 Q6ZR03 302 aa9.19□□□□□ -0.94
SEH1L-208ENST00000590843 A0A1B0GW15 77 aa9.19□□□□□ -0.94
SEH1L-208ENST00000590843 P2RY4P51582 365 aa9.19□□□□□ -0.94
SEH1L-208ENST00000590843 HEATR1Q9H583 2144 aaKnown RBP9.19□□□□□ -0.94
SEH1L-208ENST00000590843 BAK1Q16611 211 aa9.19□□□□□ -0.94
SEH1L-208ENST00000590843 Q6P435 159 aa9.19□□□□□ -0.94
SEH1L-208ENST00000590843 CFHR4Q92496 578 aa9.19□□□□□ -0.94
SEH1L-208ENST00000590843 RPL35P42766 123 aaKnown RBP9.19□□□□□ -0.94
SEH1L-208ENST00000590843 DMRTA1Q5VZB9 504 aa9.19□□□□□ -0.94
SEH1L-208ENST00000590843 Q6YL49 198 aa9.19□□□□□ -0.94
SEH1L-208ENST00000590843 NYNRINQ9P2P1 1898 aaKnown RBP9.19□□□□□ -0.94
SEH1L-208ENST00000590843 TFF1P04155 84 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 PNRC2Q9NPJ4 139 aaKnown RBP9.18□□□□□ -0.94
SEH1L-208ENST00000590843 XCL2Q9UBD3 114 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 ZNF841Q6ZN19 808 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 COQ2Q96H96 371 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 PTPN13Q12923 2485 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 FCN1O00602 326 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 SEM1Q6ZVN7 128 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 LURAP1LQ8IV03 231 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 ATP6V0BQ99437 205 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 SCGB1D1O95968 90 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 LHBP01229 141 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 GZMBP10144 247 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 SCGB1D4Q6XE38 83 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 FAM89BQ8N5H3 189 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 CSTL1Q9H114 145 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 SPG11Q96JI7 2443 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 SCN2AQ99250 2005 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 M0R3E3 92 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 LIME1Q9H400 295 aa9.18□□□□□ -0.94
SEH1L-208ENST00000590843 FER1L5A0AVI2 2057 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.941e-5■■■■□ 21.5
SEH1L-208ENST00000590843 IGKV1-9A0A0C4DH69 117 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 FAM74A7A6NL05 159 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 ATP5G1P05496 136 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 ATP5G3P48201 142 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 ZNF493Q6ZR52 646 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 WIPF2Q8TF74 440 aaPredicted RBP9.17□□□□□ -0.94
SEH1L-208ENST00000590843 ZFP30Q9Y2G7 519 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 TMEM250H0YL14 139 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 CLDN34H7C241 214 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 FSTL3O95633 263 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 NTF4P34130 210 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 ZNF833PQ6ZTB9 187 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 Q6ZWC4 215 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 PSMG3Q9BT73 122 aaPredicted RBP9.17□□□□□ -0.94
SEH1L-208ENST00000590843 DOPEY2Q9Y3R5 2298 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 APCSP02743 223 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 YPEL3P61236 119 aaPredicted RBP9.17□□□□□ -0.94
SEH1L-208ENST00000590843 TMEM183BQ1AE95 376 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 TTC32Q5I0X7 151 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 TMEM183AQ8IXX5 376 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 MYLKQ15746 1914 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 NDUFA7O95182 113 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 CD74P04233 296 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 RPLP1P05386 114 aaKnown RBP9.17□□□□□ -0.94
SEH1L-208ENST00000590843 CXCL2P19875 107 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 PTTG1IPP53801 180 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 VWC2Q2TAL6 325 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 NUDT11Q96G61 164 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 CITED2Q99967 270 aaPredicted RBP9.17□□□□□ -0.94
SEH1L-208ENST00000590843 TRAPPC1Q9Y5R8 145 aa9.17□□□□□ -0.94
SEH1L-208ENST00000590843 TGIF2-C20orf24A0A0A6YYL0 155 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 PFN1P07737 140 aaKnown RBP9.16□□□□□ -0.94
SEH1L-208ENST00000590843 IGFBP2P18065 325 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 CCKARP32238 428 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 ZNF138P52744 262 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 RNF152Q8N8N0 203 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 TBX15Q96SF7 602 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.16□□□□□ -0.94
SEH1L-208ENST00000590843 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 LYL1P12980 280 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 SPXQ9BT56 116 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 Q9H3A6 140 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 HSPB8Q9UJY1 196 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 RBFOX3A6NFN3 312 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 SRRM4A7MD48 611 aaKnown RBP9.16□□□□□ -0.94
SEH1L-208ENST00000590843 HMSDA8MTL9 139 aa9.16□□□□□ -0.94
SEH1L-208ENST00000590843 FOLR2P14207 255 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms