RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MPTX1A8MV57 137 aa15.07■□□□□ 0
SS18-224ENST00000584083 K7EQG2 157 aa15.07■□□□□ 0
SS18-224ENST00000584083 PLA2G10O15496 165 aa15.07■□□□□ 0
SS18-224ENST00000584083 LYRM1O43325 122 aa15.07■□□□□ 0
SS18-224ENST00000584083 FABP1P07148 127 aa15.07■□□□□ 0
SS18-224ENST00000584083 SPANXN5Q5MJ07 72 aa15.07■□□□□ 0
SS18-224ENST00000584083 C16orf54Q6UWD8 224 aa15.07■□□□□ 0
SS18-224ENST00000584083 PBDC1Q9BVG4 233 aa15.07■□□□□ 0
SS18-224ENST00000584083 CSTL1Q9H114 145 aa15.07■□□□□ 0
SS18-224ENST00000584083 AP2S1P53680 142 aaPredicted RBP15.06■□□□□ 0
SS18-224ENST00000584083 ZNF90Q03938 601 aa15.06■□□□□ 0
SS18-224ENST00000584083 GLMPQ8WWB7 406 aa15.06■□□□□ 0
SS18-224ENST00000584083 RNF125Q96EQ8 232 aa15.06■□□□□ 0
SS18-224ENST00000584083 IGKV1D-37A0A075B6S9 117 aa15.05■□□□□ -0
SS18-224ENST00000584083 H3BP45 60 aa15.05■□□□□ -0
SS18-224ENST00000584083 ZNF688P0C7X2 276 aa15.05■□□□□ -0
SS18-224ENST00000584083 NKX2-1P43699 371 aaPredicted RBP15.05■□□□□ -0
SS18-224ENST00000584083 POLR2GP62487 172 aaKnown RBP eCLIP15.05■□□□□ -0
SS18-224ENST00000584083 ID3Q02535 119 aa15.05■□□□□ -0
SS18-224ENST00000584083 RNF183Q96D59 192 aa15.05■□□□□ -0
SS18-224ENST00000584083 C20orf85Q9H1P6 137 aa15.05■□□□□ -0
SS18-224ENST00000584083 PFDN2Q9UHV9 154 aa15.05■□□□□ -0
SS18-224ENST00000584083 STRAPQ9Y3F4 350 aaKnown RBP15.05■□□□□ -0
SS18-224ENST00000584083 AGRNO00468 2067 aa15.04■□□□□ -0
SS18-224ENST00000584083 OR2F1Q13607 317 aa15.04■□□□□ -0
SS18-224ENST00000584083 CCDC32Q9BV29 185 aa15.04■□□□□ -0
SS18-224ENST00000584083 SNRPGP15A8MWD9 76 aa15.03■□□□□ -0
SS18-224ENST00000584083 BUB3O43684 328 aa15.03■□□□□ -0
SS18-224ENST00000584083 TCRBP04435 133 aa15.03■□□□□ -0
SS18-224ENST00000584083 NUP62P37198 522 aaPredicted RBP15.03■□□□□ -0
SS18-224ENST00000584083 LYZP61626 148 aa15.03■□□□□ -0
SS18-224ENST00000584083 STHQ8IWL8 128 aa15.03■□□□□ -0
SS18-224ENST00000584083 OR4D5Q8NGN0 318 aa15.03■□□□□ -0
SS18-224ENST00000584083 DCANP1Q8TF63 244 aa15.03■□□□□ -0
SS18-224ENST00000584083 MITD1Q8WV92 249 aa15.03■□□□□ -0
SS18-224ENST00000584083 TRGV9Q99603 122 aa15.03■□□□□ -0
SS18-224ENST00000584083 PSENENQ9NZ42 101 aa15.03■□□□□ -0
SS18-224ENST00000584083 TRAV6A0A075B6T7 132 aa15.02■□□□□ -0
SS18-224ENST00000584083 A0A0J9YWU9 116 aa15.02■□□□□ -0
SS18-224ENST00000584083 SSSCA1O60232 199 aa15.02■□□□□ -0
SS18-224ENST00000584083 SCGB1D2O95969 90 aa15.02■□□□□ -0
SS18-224ENST00000584083 IAH1Q2TAA2 248 aaPredicted RBP15.02■□□□□ -0
SS18-224ENST00000584083 OR8G2PQ6IF36 304 aa15.02■□□□□ -0
SS18-224ENST00000584083 SIGLEC15Q6ZMC9 328 aa15.02■□□□□ -0
SS18-224ENST00000584083 THAP8Q8NA92 274 aa15.02■□□□□ -0
SS18-224ENST00000584083 GSKIPQ9P0R6 139 aa15.02■□□□□ -0
SS18-224ENST00000584083 LINC00299Q6ZSB3 139 aa15.01□□□□□ -0.01
SS18-224ENST00000584083 S100ZQ8WXG8 99 aa15.01□□□□□ -0.01
SS18-224ENST00000584083 PPP1R14BQ96C90 147 aa15.01□□□□□ -0.01
SS18-224ENST00000584083 IGKV1OR2-108A0A075B7D4 117 aa15□□□□□ -0.01
SS18-224ENST00000584083 PRSS46E5RG02 174 aa15□□□□□ -0.01
SS18-224ENST00000584083 CA1P00915 261 aaPredicted RBP15□□□□□ -0.01
SS18-224ENST00000584083 AKR1C1Q04828 323 aa15□□□□□ -0.01
SS18-224ENST00000584083 SMIM8Q96KF7 97 aa15□□□□□ -0.01
SS18-224ENST00000584083 NRN1Q9NPD7 142 aa15□□□□□ -0.01
SS18-224ENST00000584083 NUDT15Q9NV35 164 aa15□□□□□ -0.01
SS18-224ENST00000584083 TENM2Q9NT68 2774 aa15□□□□□ -0.01
SS18-224ENST00000584083 KNCNA6PVL3 124 aa14.99□□□□□ -0.01
SS18-224ENST00000584083 PSMG4Q5JS54 123 aa14.99□□□□□ -0.01
SS18-224ENST00000584083 ACOT7LQ6ZUV0 252 aa14.99□□□□□ -0.01
SS18-224ENST00000584083 ZBTB8BQ8NAP8 495 aaPredicted RBP14.99□□□□□ -0.01
SS18-224ENST00000584083 GATAD1Q8WUU5 269 aa14.99□□□□□ -0.01
SS18-224ENST00000584083 FAM240BA0A1B0GVZ2 78 aa14.98□□□□□ -0.01
SS18-224ENST00000584083 SMCO3A2RU48 225 aa14.98□□□□□ -0.01
SS18-224ENST00000584083 A6NHS1 94 aa14.98□□□□□ -0.01
SS18-224ENST00000584083 CFDP00746 253 aaPredicted RBP14.98□□□□□ -0.01
SS18-224ENST00000584083 SNRPD3P62318 126 aaKnown RBP14.98□□□□□ -0.01
SS18-224ENST00000584083 ZNF846Q147U1 533 aa14.98□□□□□ -0.01
SS18-224ENST00000584083 ACTL10Q5JWF8 245 aa14.98□□□□□ -0.01
SS18-224ENST00000584083 MZT2BQ6NZ67 158 aa14.98□□□□□ -0.01
SS18-224ENST00000584083 RAB40CQ96S21 281 aa14.98□□□□□ -0.01
SS18-224ENST00000584083 RARRES2Q99969 163 aa14.98□□□□□ -0.01
SS18-224ENST00000584083 CCSO14618 274 aa14.97□□□□□ -0.01
SS18-224ENST00000584083 H2AFB2P0C5Z0 115 aa14.97□□□□□ -0.01
SS18-224ENST00000584083 TRPT1Q86TN4 253 aaKnown RBP14.97□□□□□ -0.01
SS18-224ENST00000584083 ZNF431Q8TF32 576 aaPredicted RBP14.97□□□□□ -0.01
SS18-224ENST00000584083 SEC22CQ9BRL7 303 aa14.97□□□□□ -0.01
SS18-224ENST00000584083 FBXL17Q9UF56 701 aa14.97□□□□□ -0.01
SS18-224ENST00000584083 CXorf65A6NEN9 183 aa14.96□□□□□ -0.01
SS18-224ENST00000584083 FAM25EA8MYX2 175 aa14.96□□□□□ -0.01
SS18-224ENST00000584083 METTL15P1P0C7V9 234 aa14.96□□□□□ -0.01
SS18-224ENST00000584083 PAX9P55771 341 aa14.96□□□□□ -0.01
SS18-224ENST00000584083 C1orf194Q5T5A4 169 aa14.96□□□□□ -0.01
SS18-224ENST00000584083 OR8I2Q8N0Y5 310 aa14.96□□□□□ -0.01
SS18-224ENST00000584083 TMEM217Q8N7C4 229 aa14.96□□□□□ -0.01
SS18-224ENST00000584083 BPIFCQ8NFQ6 507 aa14.96□□□□□ -0.01
SS18-224ENST00000584083 OR11H2Q8NH07 326 aa14.96□□□□□ -0.01
SS18-224ENST00000584083 LCE6AA0A183 80 aa14.95□□□□□ -0.02
SS18-224ENST00000584083 GATA2P23769 480 aaPredicted RBP14.95□□□□□ -0.02
SS18-224ENST00000584083 EWSR1Q01844 656 aaKnown RBP eCLIP14.95□□□□□ -0.02
SS18-224ENST00000584083 PMS2P11Q13670 270 aa14.95□□□□□ -0.02
SS18-224ENST00000584083 MORN3Q6PF18 240 aaPredicted RBP14.95□□□□□ -0.02
SS18-224ENST00000584083 TMEM144Q7Z5S9 345 aa14.95□□□□□ -0.02
SS18-224ENST00000584083 SEPSECSQ9HD40 501 aaKnown RBP14.95□□□□□ -0.02
SS18-224ENST00000584083 CSMD3Q7Z407 3707 aa14.94□□□□□ -0.02
SS18-224ENST00000584083 C5orf51A6NDU8 294 aa14.94□□□□□ -0.02
SS18-224ENST00000584083 PMS2P5A8MQ11 134 aa14.94□□□□□ -0.02
SS18-224ENST00000584083 CCNKO75909 580 aa14.94□□□□□ -0.02
SS18-224ENST00000584083 MBPP02686 304 aaPredicted RBP14.94□□□□□ -0.02
SS18-224ENST00000584083 SPP1P10451 314 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms