RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 RAB11AP62491 216 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 LEMD1Q68G75 181 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 SLC35E1Q96K37 410 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 FLVCR2Q9UPI3 526 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 PLECQ15149 4684 aaKnown RBP16.86■□□□□ 0.29
VAPA-205ENST00000578314 BUB3O43684 328 aa16.86■□□□□ 0.29
VAPA-205ENST00000578314 IL7P13232 177 aa16.86■□□□□ 0.29
VAPA-205ENST00000578314 ATF4P18848 351 aaPredicted RBP16.86■□□□□ 0.29
VAPA-205ENST00000578314 OR51G1Q8NGK1 321 aa16.86■□□□□ 0.29
VAPA-205ENST00000578314 GATAD1Q8WUU5 269 aa16.86■□□□□ 0.29
VAPA-205ENST00000578314 MAGT1Q9H0U3 335 aa16.86■□□□□ 0.29
VAPA-205ENST00000578314 HYDINQ4G0P3 5121 aa16.86■□□□□ 0.29
VAPA-205ENST00000578314 LINC00854A0A1B0GVQ3 168 aa16.85■□□□□ 0.29
VAPA-205ENST00000578314 ZFP92A6NM28 416 aa16.85■□□□□ 0.29
VAPA-205ENST00000578314 RPP30P78346 268 aaKnown RBP16.85■□□□□ 0.29
VAPA-205ENST00000578314 RNF125Q96EQ8 232 aa16.85■□□□□ 0.29
VAPA-205ENST00000578314 EPPK1P58107 5090 aaKnown RBP16.84■□□□□ 0.29
VAPA-205ENST00000578314 ADAP1O75689 374 aa16.84■□□□□ 0.29
VAPA-205ENST00000578314 OR4E1P0C645 316 aa16.84■□□□□ 0.29
VAPA-205ENST00000578314 ZNF90Q03938 601 aa16.84■□□□□ 0.29
VAPA-205ENST00000578314 DHRS2Q13268 280 aa16.84■□□□□ 0.29
VAPA-205ENST00000578314 PRSS46E5RG02 174 aa16.83■□□□□ 0.28
VAPA-205ENST00000578314 ZNF688P0C7X2 276 aa16.83■□□□□ 0.28
VAPA-205ENST00000578314 EWSR1Q01844 656 aaKnown RBP eCLIP16.83■□□□□ 0.28
VAPA-205ENST00000578314 ID3Q02535 119 aa16.83■□□□□ 0.28
VAPA-205ENST00000578314 CNPY1Q3B7I2 92 aa16.83■□□□□ 0.28
VAPA-205ENST00000578314 OR8G2PQ6IF36 304 aa16.83■□□□□ 0.28
VAPA-205ENST00000578314 COQ8AQ8NI60 647 aa16.83■□□□□ 0.28
VAPA-205ENST00000578314 WRBO00258 174 aa16.82■□□□□ 0.28
VAPA-205ENST00000578314 FABP1P07148 127 aa16.82■□□□□ 0.28
VAPA-205ENST00000578314 STHQ8IWL8 128 aa16.82■□□□□ 0.28
VAPA-205ENST00000578314 THAP8Q8NA92 274 aa16.82■□□□□ 0.28
VAPA-205ENST00000578314 TRGV9Q99603 122 aa16.82■□□□□ 0.28
VAPA-205ENST00000578314 SEPSECSQ9HD40 501 aaKnown RBP16.82■□□□□ 0.28
VAPA-205ENST00000578314 PFDN2Q9UHV9 154 aa16.82■□□□□ 0.28
VAPA-205ENST00000578314 PAIP2BQ9ULR5 123 aaKnown RBP16.82■□□□□ 0.28
VAPA-205ENST00000578314 SNRPGP15A8MWD9 76 aa16.81■□□□□ 0.28
VAPA-205ENST00000578314 PLA2G10O15496 165 aa16.81■□□□□ 0.28
VAPA-205ENST00000578314 CA1P00915 261 aaPredicted RBP16.81■□□□□ 0.28
VAPA-205ENST00000578314 ANXA7P20073 488 aaKnown RBP16.81■□□□□ 0.28
VAPA-205ENST00000578314 NUP62P37198 522 aaPredicted RBP16.81■□□□□ 0.28
VAPA-205ENST00000578314 SIGLEC15Q6ZMC9 328 aa16.81■□□□□ 0.28
VAPA-205ENST00000578314 TRPT1Q86TN4 253 aaKnown RBP16.81■□□□□ 0.28
VAPA-205ENST00000578314 RARRES2Q99969 163 aa16.81■□□□□ 0.28
VAPA-205ENST00000578314 NRN1Q9NPD7 142 aa16.81■□□□□ 0.28
VAPA-205ENST00000578314 IGKV1OR2-108A0A075B7D4 117 aa16.8■□□□□ 0.28
VAPA-205ENST00000578314 IFNA21P01568 189 aa16.8■□□□□ 0.28
VAPA-205ENST00000578314 C4orf46Q504U0 113 aa16.8■□□□□ 0.28
VAPA-205ENST00000578314 SPANXN5Q5MJ07 72 aa16.8■□□□□ 0.28
VAPA-205ENST00000578314 TMEM217Q8N7C4 229 aa16.8■□□□□ 0.28
VAPA-205ENST00000578314 OR4D5Q8NGN0 318 aa16.8■□□□□ 0.28
VAPA-205ENST00000578314 PBDC1Q9BVG4 233 aa16.8■□□□□ 0.28
VAPA-205ENST00000578314 ALMS1Q8TCU4 4167 aa16.8■□□□□ 0.28
VAPA-205ENST00000578314 GIG44P09565 113 aaPredicted RBP16.79■□□□□ 0.28
VAPA-205ENST00000578314 STRAPQ9Y3F4 350 aaKnown RBP16.79■□□□□ 0.28
VAPA-205ENST00000578314 KNCNA6PVL3 124 aa16.78■□□□□ 0.28
VAPA-205ENST00000578314 JTBO76095 146 aa16.78■□□□□ 0.28
VAPA-205ENST00000578314 NKX2-1P43699 371 aaPredicted RBP16.78■□□□□ 0.28
VAPA-205ENST00000578314 POLR2GP62487 172 aaKnown RBP eCLIP16.78■□□□□ 0.28
VAPA-205ENST00000578314 C1orf194Q5T5A4 169 aa16.78■□□□□ 0.28
VAPA-205ENST00000578314 OR11H2Q8NH07 326 aa16.78■□□□□ 0.28
VAPA-205ENST00000578314 MITD1Q8WV92 249 aa16.78■□□□□ 0.28
VAPA-205ENST00000578314 RAB40CQ96S21 281 aa16.78■□□□□ 0.28
VAPA-205ENST00000578314 LYRM1O43325 122 aa16.77■□□□□ 0.28
VAPA-205ENST00000578314 CFDP00746 253 aaPredicted RBP16.77■□□□□ 0.28
VAPA-205ENST00000578314 SPP1P10451 314 aa16.77■□□□□ 0.28
VAPA-205ENST00000578314 LYZP61626 148 aa16.77■□□□□ 0.28
VAPA-205ENST00000578314 SNRPD3P62318 126 aaKnown RBP16.77■□□□□ 0.28
VAPA-205ENST00000578314 OR2F1Q13607 317 aa16.77■□□□□ 0.28
VAPA-205ENST00000578314 TMEM41BQ5BJD5 291 aa16.77■□□□□ 0.28
VAPA-205ENST00000578314 PSMG4Q5JS54 123 aa16.77■□□□□ 0.28
VAPA-205ENST00000578314 MORN3Q6PF18 240 aaPredicted RBP16.77■□□□□ 0.28
VAPA-205ENST00000578314 CXorf65A6NEN9 183 aa16.76■□□□□ 0.27
VAPA-205ENST00000578314 H3BP45 60 aa16.76■□□□□ 0.27
VAPA-205ENST00000578314 ACTL10Q5JWF8 245 aa16.76■□□□□ 0.27
VAPA-205ENST00000578314 SMIM8Q96KF7 97 aa16.76■□□□□ 0.27
VAPA-205ENST00000578314 PMS2P11Q13670 270 aa16.75■□□□□ 0.27
VAPA-205ENST00000578314 LINC00299Q6ZSB3 139 aa16.75■□□□□ 0.27
VAPA-205ENST00000578314 C20orf85Q9H1P6 137 aa16.75■□□□□ 0.27
VAPA-205ENST00000578314 C11orf68Q9H3H3 251 aaKnown RBP16.75■□□□□ 0.27
VAPA-205ENST00000578314 PSENENQ9NZ42 101 aa16.75■□□□□ 0.27
VAPA-205ENST00000578314 FBXL17Q9UF56 701 aa16.75■□□□□ 0.27
VAPA-205ENST00000578314 NUPR2A6NF83 97 aa16.74■□□□□ 0.27
VAPA-205ENST00000578314 CEMP1Q6PRD7 247 aaPredicted RBP16.74■□□□□ 0.27
VAPA-205ENST00000578314 CCDC32Q9BV29 185 aa16.74■□□□□ 0.27
VAPA-205ENST00000578314 PMS2P5A8MQ11 134 aa16.73■□□□□ 0.27
VAPA-205ENST00000578314 TCRBP04435 133 aa16.73■□□□□ 0.27
VAPA-205ENST00000578314 PAX9P55771 341 aa16.73■□□□□ 0.27
VAPA-205ENST00000578314 IAH1Q2TAA2 248 aaPredicted RBP16.73■□□□□ 0.27
VAPA-205ENST00000578314 ACOT7LQ6ZUV0 252 aa16.73■□□□□ 0.27
VAPA-205ENST00000578314 TMEM144Q7Z5S9 345 aa16.73■□□□□ 0.27
VAPA-205ENST00000578314 SLC45A2Q9UMX9 530 aa16.73■□□□□ 0.27
VAPA-205ENST00000578314 BIRC6Q9NR09 4857 aa16.73■□□□□ 0.27
VAPA-205ENST00000578314 SSSCA1O60232 199 aa16.72■□□□□ 0.27
VAPA-205ENST00000578314 C4BPBP20851 252 aa16.72■□□□□ 0.27
VAPA-205ENST00000578314 ZBTB8BQ8NAP8 495 aaPredicted RBP16.72■□□□□ 0.27
VAPA-205ENST00000578314 H3BMM0 161 aa16.71■□□□□ 0.27
VAPA-205ENST00000578314 TAS2R30P59541 319 aa16.71■□□□□ 0.27
VAPA-205ENST00000578314 AKR1C1Q04828 323 aa16.71■□□□□ 0.27
VAPA-205ENST00000578314 TMEM14EPQ6UXP3 125 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms