RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 RNF24Q9Y225 148 aa9.39□□□□□ -0.91
RARA-208ENST00000577646 ZNF256Q9Y2P7 627 aaPredicted RBP9.39□□□□□ -0.91
RARA-208ENST00000577646 IGHV3-35A0A0C4DH35 117 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 WI2-2373I1.2A0A1W2PRP0 233 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 FAM24AA6NFZ4 105 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 MPDU1O75352 247 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 PSG1P11464 419 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 SLC38A11Q08AI6 406 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 LRRC37A5PQ49AS3 106 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 BPIFCQ8NFQ6 507 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 CHAC2Q8WUX2 184 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 GRAMD2BQ96HH9 432 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 ZNF414Q96IQ9 312 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 UQCC1Q9NVA1 299 aa9.38□□□□□ -0.91
RARA-208ENST00000577646 IGKV1D-37A0A075B6S9 117 aa9.37□□□□□ -0.91
RARA-208ENST00000577646 H0YIZ8 118 aa9.37□□□□□ -0.91
RARA-208ENST00000577646 CST7O76096 145 aa9.37□□□□□ -0.91
RARA-208ENST00000577646 EIF2B2P49770 351 aaKnown RBP9.37□□□□□ -0.91
RARA-208ENST00000577646 ADAMTSL5Q6ZMM2 481 aa9.37□□□□□ -0.91
RARA-208ENST00000577646 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
RARA-208ENST00000577646 TMEM147Q9BVK8 224 aa9.37□□□□□ -0.91
RARA-208ENST00000577646 VSIRQ9H7M9 311 aa9.37□□□□□ -0.91
RARA-208ENST00000577646 OR5AC2Q9NZP5 309 aa9.37□□□□□ -0.91
RARA-208ENST00000577646 LSM4Q9Y4Z0 139 aaKnown RBP9.37□□□□□ -0.91
RARA-208ENST00000577646 IGKV1OR2-108A0A075B7D4 117 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 IGSF23A1L1A6 192 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 SMCO3A2RU48 225 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 CHEK1O14757 476 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 IL4P05112 153 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 HNRNPCP07910 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
RARA-208ENST00000577646 RPL12P30050 165 aaKnown RBP9.36□□□□□ -0.91
RARA-208ENST00000577646 AP2S1P53680 142 aaPredicted RBP9.36□□□□□ -0.91
RARA-208ENST00000577646 CMC4P56277 68 aaPredicted RBP9.36□□□□□ -0.91
RARA-208ENST00000577646 PLP1P60201 277 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 EWSR1Q01844 656 aaKnown RBP eCLIP9.36□□□□□ -0.913e-6■■■■□ 25.7
RARA-208ENST00000577646 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 C1orf194Q5T5A4 169 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 Q6ZNX1 250 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 RBPMS2Q6ZRY4 209 aaKnown RBP9.36□□□□□ -0.91
RARA-208ENST00000577646 ZNF546Q86UE3 836 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 HAPLN4Q86UW8 402 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 RNF125Q96EQ8 232 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 RABAC1Q9UI14 185 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 U3KQE9 123 aa9.36□□□□□ -0.91
RARA-208ENST00000577646 TRAV2A0A0B4J234 112 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 HELTA6NFD8 242 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 TSPAN4O14817 238 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 DFFBO76075 338 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 PAFAH1B2P68402 229 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 ZNF90Q03938 601 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 CD300EQ496F6 205 aaPredicted RBP9.35□□□□□ -0.91
RARA-208ENST00000577646 CYP2G1PQ6ZSU1 146 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 TMEM217Q8N7C4 229 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 WDR89Q96FK6 387 aaPredicted RBP9.35□□□□□ -0.91
RARA-208ENST00000577646 SPAG8Q99932 426 aaPredicted RBP9.35□□□□□ -0.91
RARA-208ENST00000577646 MBD2Q9UBB5 411 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 FBXL17Q9UF56 701 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 MLXQ9UH92 298 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 WDR83OSQ9Y284 106 aa9.35□□□□□ -0.91
RARA-208ENST00000577646 CCNKO75909 580 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 PRB2P02812 416 aaPredicted RBP9.34□□□□□ -0.91
RARA-208ENST00000577646 GP9P14770 177 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 KRTAP10-11P60412 298 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 NHLH2Q02577 135 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 BTNL8Q6UX41 500 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 GTSCR1Q86UQ5 136 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 INO80EQ8NBZ0 244 aaPredicted RBP9.34□□□□□ -0.91
RARA-208ENST00000577646 OR5C1Q8NGR4 320 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 OR2T35Q8NGX2 323 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 KCNIP2Q9NS61 270 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 HSPB11Q9Y547 144 aa9.34□□□□□ -0.91
RARA-208ENST00000577646 ELOA3CA0A087WX78 387 aaPredicted RBP9.33□□□□□ -0.92
RARA-208ENST00000577646 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
RARA-208ENST00000577646 ZNF785A8K8V0 405 aa9.33□□□□□ -0.92
RARA-208ENST00000577646 AGPAT2O15120 278 aa9.33□□□□□ -0.92
RARA-208ENST00000577646 RPL29P47914 159 aaKnown RBP9.33□□□□□ -0.92
RARA-208ENST00000577646 CAMLGP49069 296 aa9.33□□□□□ -0.92
RARA-208ENST00000577646 FAM90A2PQ658T7 463 aa9.33□□□□□ -0.92
RARA-208ENST00000577646 MRAPQ8TCY5 172 aa9.33□□□□□ -0.92
RARA-208ENST00000577646 GPR82Q96P67 336 aa9.33□□□□□ -0.92
RARA-208ENST00000577646 AQP10Q96PS8 301 aa9.33□□□□□ -0.92
RARA-208ENST00000577646 NEURL2Q9BR09 285 aa9.33□□□□□ -0.92
RARA-208ENST00000577646 PARD6GQ9BYG4 376 aaPredicted RBP9.33□□□□□ -0.92
RARA-208ENST00000577646 ZNF207O43670 478 aaKnown RBP9.32□□□□□ -0.92
RARA-208ENST00000577646 BUB3O43684 328 aa9.32□□□□□ -0.92
RARA-208ENST00000577646 HYPMO75409 117 aa9.32□□□□□ -0.92
RARA-208ENST00000577646 IFNA5P01569 189 aa9.32□□□□□ -0.92
RARA-208ENST00000577646 USF2Q15853 346 aaPredicted RBP9.32□□□□□ -0.92
RARA-208ENST00000577646 SAMD13Q5VXD3 122 aa9.32□□□□□ -0.92
RARA-208ENST00000577646 C16orf54Q6UWD8 224 aa9.32□□□□□ -0.92
RARA-208ENST00000577646 Q6ZRG5 221 aa9.32□□□□□ -0.92
RARA-208ENST00000577646 TMEM61Q8N0U2 210 aa9.32□□□□□ -0.92
RARA-208ENST00000577646 ATP5SQ99766 215 aa9.32□□□□□ -0.92
RARA-208ENST00000577646 PBDC1Q9BVG4 233 aa9.32□□□□□ -0.92
RARA-208ENST00000577646 SEPSECSQ9HD40 501 aaKnown RBP9.32□□□□□ -0.92
RARA-208ENST00000577646 AURKAIP1Q9NWT8 199 aaPredicted RBP9.32□□□□□ -0.92
RARA-208ENST00000577646 SORL1Q92673 2214 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms