RNA–Protein interactions for RNA: ENST00000564774.5

TAF1C-212, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 2

Gene TAF1C, Length 4,637 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-212	ENST00000564774	PAM16	Q9Y3D7	125 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	PLXNB3	Q9ULL4	1909 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	HERPUD1	Q15011	391 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	TEX38	Q6PEX7	206 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	ZNF257	Q9Y2Q1	563 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	SOD3	P08294	240 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	PSG1	P11464	419 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	RPL13A	P40429	203 aa	Known RBP	11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.24	□□□□□ -0.61	3e-7	■□□□□ 8.4
TAF1C-212	ENST00000564774	FBLN7	Q53RD9	439 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	KLHL30-AS1	Q8NEE0	82 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	OR4C46	A6NHA9	309 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	RPL15	P61313	204 aa	Known RBP	11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	PSMG4	Q5JS54	123 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	FAM71F2	Q6NXP2	309 aa		11.24	□□□□□ -0.61
TAF1C-212	ENST00000564774	ZNF688	P0C7X2	276 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	NMU	P48645	174 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	QRFP	P83859	136 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	DEFB121	Q5J5C9	76 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	ZNF506	Q5JVG8	444 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	CD7	P09564	240 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	RNF5	Q99942	180 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	HSPB9	Q9BQS6	159 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	SLC50A1	Q9BRV3	221 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	TBL2	Q9Y4P3	447 aa	Known RBP	11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	IGLV1-44	P01699	117 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	AREG	P15514	252 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	EFNB3	Q15768	340 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	LRTM2	Q8N967	370 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	OR4D5	Q8NGN0	318 aa		11.23	□□□□□ -0.61
TAF1C-212	ENST00000564774	PMS2P5	A8MQ11	134 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774	LEPROTL1	O95214	131 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774	CBLN1	P23435	193 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774	TREML4	Q6UXN2	200 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774	TNFRSF18	Q9Y5U5	241 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774	TRAV5	A0A0B4J249	113 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774	PSMB2	P49721	201 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774	NDP	Q00604	133 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774	PRSS2	P07478	247 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774	CDC42EP3	Q9UKI2	254 aa		11.22	□□□□□ -0.61
TAF1C-212	ENST00000564774		A0A1B0GWJ7	208 aa		11.21	□□□□□ -0.61
TAF1C-212	ENST00000564774	DIRC3	C9JPN6	131 aa		11.21	□□□□□ -0.61
TAF1C-212	ENST00000564774	IGFL2	Q6UWQ7	119 aa		11.21	□□□□□ -0.61
TAF1C-212	ENST00000564774	GTSCR1	Q86UQ5	136 aa		11.21	□□□□□ -0.61
TAF1C-212	ENST00000564774	TRBV6-6	A0A0A6YYG2	114 aa		11.21	□□□□□ -0.61
TAF1C-212	ENST00000564774		E9PQ18	207 aa		11.21	□□□□□ -0.61
TAF1C-212	ENST00000564774	SAMD13	Q5VXD3	122 aa		11.21	□□□□□ -0.61
TAF1C-212	ENST00000564774	BIVM	Q86UB2	503 aa		11.21	□□□□□ -0.61
TAF1C-212	ENST00000564774	IGLV3-9	A0A075B6K5	115 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	FABP5P3	A8MUU1	101 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	GATA4	P43694	442 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	FAM209B	Q5JX69	171 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	IGF2-AS	Q6U949	168 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	REC114	Q7Z4M0	266 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774		A0A1B0GUT8	65 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	IFITM10	A6NMD0	228 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	GATA3	P23771	443 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	PPIF	P30405	207 aa	Known RBP	11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	UBE2E1	P51965	193 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	TMEM136	Q6ZRR5	245 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	WDR86	Q86TI4	376 aa		11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	CIART	Q8N365	385 aa	Predicted RBP	11.21	□□□□□ -0.62
TAF1C-212	ENST00000564774	FAM90A9P	A6NNJ1	464 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	NMS	Q5H8A3	153 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	ASCL4	Q6XD76	172 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	LOX	P28300	417 aa	Predicted RBP	11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	HBB	P68871	147 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	MLANA	Q16655	118 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	GGTLC1	Q9BX51	225 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	OTOR	Q9NRC9	128 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	DKK4	Q9UBT3	224 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774		H7C1H1	209 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	VENTX	O95231	258 aa		11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	GEMIN7	Q9H840	131 aa	Known RBP	11.2	□□□□□ -0.62
TAF1C-212	ENST00000564774	IGHV1-69D	A0A0B4J2H0	117 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	DUSP14	O95147	198 aa	Known RBP	11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	IGHV1-69	P01742	117 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	SRP19	P09132	144 aa	Known RBP	11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	IL17REL	Q6ZVW7	336 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	SCRT1	Q9BWW7	348 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	F11R	Q9Y624	299 aa	Known RBP	11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	EPG5	Q9HCE0	2579 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	C2orf16	Q68DN1	1984 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	IGKV1-6	A0A0C4DH72	117 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	SIGLEC15	Q6ZMC9	328 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	FER1L6-AS1	Q8NA97	138 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	ATG101	Q9BSB4	218 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	EPDR1	Q9UM22	224 aa		11.19	□□□□□ -0.62
TAF1C-212	ENST00000564774	REG4	Q9BYZ8	158 aa		11.18	□□□□□ -0.62
TAF1C-212	ENST00000564774	SDF2L1	Q9HCN8	221 aa		11.18	□□□□□ -0.62
TAF1C-212	ENST00000564774	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.18	□□□□□ -0.62
TAF1C-212	ENST00000564774	PGPEP1L	A6NFU8	196 aa		11.18	□□□□□ -0.62
TAF1C-212	ENST00000564774	OVOL3	O00110	214 aa		11.18	□□□□□ -0.62
TAF1C-212	ENST00000564774		Q6ZRM9	215 aa		11.18	□□□□□ -0.62
TAF1C-212	ENST00000564774	PSG8	Q9UQ74	426 aa		11.18	□□□□□ -0.62
TAF1C-212	ENST00000564774	FOSL1	P15407	271 aa		11.18	□□□□□ -0.62
TAF1C-212	ENST00000564774	LMO1	P25800	156 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms