RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 K7EIM0 57 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 AGPAT2O15120 278 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 IGHV3-48P01763 117 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 CLEC3BP05452 202 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 RD3LP0DJH9 198 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 SPP1P10451 314 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 PPIFP30405 207 aaKnown RBP9.12□□□□□ -0.95
LDLR-212ENST00000560467 RPL29P47914 159 aaKnown RBP9.12□□□□□ -0.95
LDLR-212ENST00000560467 RELQ04864 619 aaPredicted RBP9.12□□□□□ -0.95
LDLR-212ENST00000560467 EGFEM1PQ0D2K5 195 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 MLANAQ16655 118 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 KLK9Q2XQG4 91 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 C19orf54Q5BKX5 351 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 PXDC1Q5TGL8 231 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 C19orf35Q6ZS72 473 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 CYP2G1PQ6ZSU1 146 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 LINC00482Q8N8I6 264 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 TRGV9Q99603 122 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 B9D2Q9BPU9 175 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 FNDC4Q9H6D8 234 aaPredicted RBP9.12□□□□□ -0.95
LDLR-212ENST00000560467 GNB4Q9HAV0 340 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 KLK9Q9UKQ9 250 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 RNF24Q9Y225 148 aa9.12□□□□□ -0.95
LDLR-212ENST00000560467 TNCP24821 2201 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 STAB2Q8WWQ8 2551 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 A0A1W2PPV4 95 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 FCGR2BP31994 310 aaPredicted RBP9.11□□□□□ -0.95
LDLR-212ENST00000560467 BLOC1S1P78537 153 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 ZNF616Q08AN1 781 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 FFAR4Q5NUL3 377 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 ALKAL2Q6UX46 152 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 DPPA3Q6W0C5 159 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 THAP8Q8NA92 274 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 OR1L4Q8NGR5 311 aa9.11□□□□□ -0.95
LDLR-212ENST00000560467 ELOA3CA0A087WX78 387 aaPredicted RBP9.1□□□□□ -0.95
LDLR-212ENST00000560467 OR2T8A6NH00 312 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 COX7A2P2O60397 106 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 ELLP55199 621 aaPredicted RBP9.1□□□□□ -0.95
LDLR-212ENST00000560467 YPEL3P61236 119 aaPredicted RBP9.1□□□□□ -0.95
LDLR-212ENST00000560467 B2MP61769 119 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 RUNX1Q01196 453 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 CFHR3Q02985 330 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 TMEM182Q6ZP80 229 aaPredicted RBP9.1□□□□□ -0.95
LDLR-212ENST00000560467 ZNF502Q8TBZ5 544 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 PFDN5Q99471 154 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 RNF2Q99496 336 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 RSG1Q9BU20 258 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 ACTR3CQ9C0K3 210 aaPredicted RBP9.1□□□□□ -0.95
LDLR-212ENST00000560467 SLC39A9Q9NUM3 307 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 LSM4Q9Y4Z0 139 aaKnown RBP9.1□□□□□ -0.95
LDLR-212ENST00000560467 DMRT1Q9Y5R6 373 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 PXMP4Q9Y6I8 212 aa9.1□□□□□ -0.95
LDLR-212ENST00000560467 MFSD2BA6NFX1 497 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 ZNF705EA8MWA4 302 aaPredicted RBP9.09□□□□□ -0.95
LDLR-212ENST00000560467 HYPMO75409 117 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 YIF1AO95070 293 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 IGHV3-23P01764 117 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 M6PRP20645 277 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 PSMB8P28062 276 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 GPR183P32249 361 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 ARL3P36405 182 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 RHOBP62745 196 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 TMEM41BQ5BJD5 291 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 CLEC19AQ6UXS0 136 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 C18orf65Q6ZTR6 163 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 STPG3Q8N7X2 389 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 OR51G1Q8NGK1 321 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 OR10G4Q8NGN3 311 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 OR10G9Q8NGN4 311 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 OR10G7Q8NGN6 311 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 DPF1Q92782 380 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 NARS2Q96I59 477 aaKnown RBP9.09□□□□□ -0.95
LDLR-212ENST00000560467 UBE2E2Q96LR5 201 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 MGST2Q99735 147 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 GGTLC1Q9BX51 225 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 SH3BGRL3Q9H299 93 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
LDLR-212ENST00000560467 SLC45A2Q9UMX9 530 aa9.09□□□□□ -0.95
LDLR-212ENST00000560467 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.08□□□□□ -0.96
LDLR-212ENST00000560467 NUDT19A8MXV4 375 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 OR5G3P0C626 314 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 LINC00869P0C866 280 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 IGLC1P0CG04 106 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 TIGITQ495A1 244 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 FAM106AQ4KMX7 169 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 MIC13Q5XKP0 118 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 ZNF600Q6ZNG1 722 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 SAT2Q96F10 170 aaPredicted RBP9.08□□□□□ -0.96
LDLR-212ENST00000560467 KLK15Q9H2R5 256 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 DNAJC4Q9NNZ3 241 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 S4R3C0 116 aa9.08□□□□□ -0.96
LDLR-212ENST00000560467 BMPR1BO00238 502 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 TGOLN2O43493 480 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 GGCTO75223 188 aaKnown RBP9.07□□□□□ -0.96
LDLR-212ENST00000560467 TOMM40O96008 361 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 IGHV3-11P01762 117 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 HBE1P02100 147 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
LDLR-212ENST00000560467 ORM2P19652 201 aa9.07□□□□□ -0.96
LDLR-212ENST00000560467 CDX1P47902 265 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms