RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 RBM38Q9H0Z9 239 aaKnown RBP7.45□□□□□ -1.22
USP3-207ENST00000558218 TENM2Q9NT68 2774 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 IGKV3-7A0A075B6H7 116 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 K7EQG2 157 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 TOMM40O96008 361 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 FABP1P07148 127 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 HNRNPCP07910 306 aaKnown RBP eCLIP7.44□□□□□ -1.22
USP3-207ENST00000558218 RD3LP0DJH9 198 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 RPL35AP18077 110 aaKnown RBP7.44□□□□□ -1.22
USP3-207ENST00000558218 NUP62P37198 522 aaPredicted RBP7.44□□□□□ -1.22
USP3-207ENST00000558218 TFPI2P48307 235 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 RPP30P78346 268 aaKnown RBP7.44□□□□□ -1.22
USP3-207ENST00000558218 DEFB135Q30KP9 77 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 TMED4Q7Z7H5 227 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 LYG2Q86SG7 212 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 OR1S1Q8NH92 325 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 NPIPB3Q92617 1050 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 CIB3Q96Q77 187 aaPredicted RBP7.44□□□□□ -1.22
USP3-207ENST00000558218 RBKSQ9H477 322 aa7.44□□□□□ -1.22
USP3-207ENST00000558218 NUPR2A6NF83 97 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 SFT2D2O95562 160 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 CFDP00746 253 aaPredicted RBP7.43□□□□□ -1.22
USP3-207ENST00000558218 IFNA4P05014 189 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 DEFB131AP59861 70 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 RAB11AP62491 216 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 RBMS2Q15434 407 aaKnown RBP7.43□□□□□ -1.22
USP3-207ENST00000558218 CNPY1Q3B7I2 92 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 MORN3Q6PF18 240 aaPredicted RBP7.43□□□□□ -1.22
USP3-207ENST00000558218 C16orf54Q6UWD8 224 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 CENPSQ8N2Z9 138 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 OR51G1Q8NGK1 321 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 DCANP1Q8TF63 244 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 SRRQ9GZT4 340 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 NDUFA13Q9P0J0 144 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 RABAC1Q9UI14 185 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 DNAH7Q8WXX0 4024 aa7.43□□□□□ -1.22
USP3-207ENST00000558218 IGHV3-66A0A0C4DH42 116 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 A0A0J9YWU9 116 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 SNRPGP15A8MWD9 76 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 BUB3O43684 328 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 IL4P05112 153 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 PSG1P11464 419 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 VAMP1P23763 118 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 LCE1DQ5T752 114 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 OR8G2PQ6IF36 304 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 STHQ8IWL8 128 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 GLMPQ8WWB7 406 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 RARRES2Q99969 163 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 PRR13Q9NZ81 148 aa7.42□□□□□ -1.22
USP3-207ENST00000558218 CENPXA8MT69 81 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 NXPH3O95157 252 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 SPP1P10451 314 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 INPP1P49441 399 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 PPP1R1AQ13522 171 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 GAMTQ14353 236 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 C1orf194Q5T5A4 169 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 CEMP1Q6PRD7 247 aaPredicted RBP7.41□□□□□ -1.22
USP3-207ENST00000558218 STXBP6Q8NFX7 210 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 ACY3Q96HD9 319 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 SLC35E1Q96K37 410 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 C7orf50Q9BRJ6 194 aaKnown RBP7.41□□□□□ -1.22
USP3-207ENST00000558218 C11orf68Q9H3H3 251 aaKnown RBP7.41□□□□□ -1.22
USP3-207ENST00000558218 KLK5Q9Y337 293 aaPredicted RBP7.41□□□□□ -1.22
USP3-207ENST00000558218 RYR3Q15413 4870 aa7.41□□□□□ -1.22
USP3-207ENST00000558218 ZFP92A6NM28 416 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 SYNGR2O43760 224 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 NDUFB6O95139 128 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 S100A7P31151 101 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 SNRPD3P62318 126 aaKnown RBP7.4□□□□□ -1.22
USP3-207ENST00000558218 DHRS2Q13268 280 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 USF2Q15853 346 aaPredicted RBP7.4□□□□□ -1.22
USP3-207ENST00000558218 GGNBP1Q5YKI7 109 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 TRIQKQ629K1 86 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 LEMD1Q68G75 181 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 TRPT1Q86TN4 253 aaKnown RBP7.4□□□□□ -1.22
USP3-207ENST00000558218 OR11H2Q8NH07 326 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 RNF125Q96EQ8 232 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 TRGV9Q99603 122 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 MFFQ9GZY8 342 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 NRN1Q9NPD7 142 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 FBXL17Q9UF56 701 aa7.4□□□□□ -1.22
USP3-207ENST00000558218 C9orf170A2RU37 121 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 CXorf65A6NEN9 183 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 CA1P00915 261 aaPredicted RBP7.39□□□□□ -1.23
USP3-207ENST00000558218 NUTF2P61970 127 aaKnown RBP7.39□□□□□ -1.23
USP3-207ENST00000558218 BAK1Q16611 211 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 SAMD13Q5VXD3 122 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 SIGLEC15Q6ZMC9 328 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 FAM24BQ8N5W8 94 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 THAP8Q8NA92 274 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 COQ8AQ8NI60 647 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 RAB40CQ96S21 281 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 SLC45A2Q9UMX9 530 aa7.39□□□□□ -1.23
USP3-207ENST00000558218 IGKV1D-37A0A075B6S9 117 aa7.38□□□□□ -1.23
USP3-207ENST00000558218 IFNA21P01568 189 aa7.38□□□□□ -1.23
USP3-207ENST00000558218 HOXB5P09067 269 aa7.38□□□□□ -1.23
USP3-207ENST00000558218 ZNF688P0C7X2 276 aa7.38□□□□□ -1.23
USP3-207ENST00000558218 ID1P41134 155 aa7.38□□□□□ -1.23
USP3-207ENST00000558218 TCTAP57738 103 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms