RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PSG4Q00888 419 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 KCNK17Q96T54 332 aa7.44□□□□□ -1.22
SYNE3-205ENST00000557275 FOXA2Q9Y261 457 aaPredicted RBP7.43□□□□□ -1.22
SYNE3-205ENST00000557275 TRAV8-3A0A0A6YYJ7 113 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 ADMP35318 185 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 GLRXP35754 106 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 NKAPP1Q8N9T2 125 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 C9JAW5 83 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 RPL23P62829 140 aaKnown RBP7.43□□□□□ -1.22
SYNE3-205ENST00000557275 TMEM240Q5SV17 173 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 UBE2DNLQ8IWF7 75 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 TECTAO75443 2155 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 GAGE7O76087 117 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 PATE4P0C8F1 98 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 GAGE12FP0CL80 117 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 GAGE12GP0CL81 117 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 GAGE12IP0CL82 117 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 TMEM141Q96I45 108 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 FN1P02751 2386 aaKnown RBP7.43□□□□□ -1.22
SYNE3-205ENST00000557275 ADAMTSL5Q6ZMM2 481 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 Q6ZT83 130 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 RMI2Q96E14 147 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 OR11H6Q8NGC7 330 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 C8orf46Q8TAG6 207 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 NBR2O15453 112 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 VN1R4Q7Z5H5 301 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 KLHDC2Q9Y2U9 406 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 NANOS3P60323 173 aaKnown RBP7.43□□□□□ -1.22
SYNE3-205ENST00000557275 FGF11Q92914 225 aa7.43□□□□□ -1.22
SYNE3-205ENST00000557275 TET2Q6N021 2002 aaPredicted RBP7.43□□□□□ -1.22
SYNE3-205ENST00000557275 KLF14Q8TD94 323 aaPredicted RBP7.42□□□□□ -1.22
SYNE3-205ENST00000557275 ITLN1Q8WWA0 313 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 CEP192Q8TEP8 1941 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 EREGO14944 169 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 MP68P56378 58 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 SIGLEC15Q6ZMC9 328 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 APOBEC3AP31941 199 aaPredicted RBP7.42□□□□□ -1.22
SYNE3-205ENST00000557275 C1QL3Q5VWW1 255 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 TEX38Q6PEX7 206 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 PRIMA1Q86XR5 153 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 GREB1LQ9C091 1923 aaPredicted RBP7.42□□□□□ -1.22
SYNE3-205ENST00000557275 REG1AP05451 166 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 ZAR1Q86SH2 424 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 TRBV5-3A0A0A0MS03 114 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 ZNF205O95201 554 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 FOXG1P55316 489 aaPredicted RBP7.42□□□□□ -1.22
SYNE3-205ENST00000557275 AGMATQ9BSE5 352 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 FOXQ1Q9C009 403 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 ACANP16112 2415 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 C2orf16Q68DN1 1984 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 RHODO00212 210 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 HLA-DMBP28068 263 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 LIMS1P48059 325 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 IGHV1-24A0A0C4DH33 117 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 MYEOVQ96EZ4 313 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 FAM181AQ8N9Y4 354 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 A0A1W2PPE3 182 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 MPZP25189 248 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 LINC00477Q96M19 166 aa7.42□□□□□ -1.22
SYNE3-205ENST00000557275 K7ERS5 55 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 FUSP35637 526 aaKnown RBP eCLIP7.41□□□□□ -1.22
SYNE3-205ENST00000557275 ZXDCQ2QGD7 858 aaPredicted RBP7.41□□□□□ -1.22
SYNE3-205ENST00000557275 DSCAML1Q8TD84 2053 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 TRAV14DV4A0A0A6YYC5 116 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 ATP5G1P05496 136 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 ATP5G3P48201 142 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 SRSF7Q16629 238 aaKnown RBP eCLIP7.41□□□□□ -1.22
SYNE3-205ENST00000557275 ACTL10Q5JWF8 245 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 DTX4Q9Y2E6 619 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 PLXNB3Q9ULL4 1909 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 CCL3P10147 92 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 VDAC2P45880 294 aaPredicted RBP7.41□□□□□ -1.22
SYNE3-205ENST00000557275 ACP7Q6ZNF0 438 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 LRP5O75197 1615 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 FBLN5Q9UBX5 448 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 A0A1W2PQF6 199 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 C9orf50Q5SZB4 431 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 UCN2Q96RP3 112 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 TLN2Q9Y4G6 2542 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 SLAQ13239 276 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 SLC25A47Q6Q0C1 308 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 PILRAQ9UKJ1 303 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 NYNRINQ9P2P1 1898 aaKnown RBP7.41□□□□□ -1.22
SYNE3-205ENST00000557275 ATOX1O00244 68 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 CD300EQ496F6 205 aaPredicted RBP7.41□□□□□ -1.22
SYNE3-205ENST00000557275 C9orf40Q8IXQ3 194 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 HIST3H2BBQ8N257 126 aa7.41□□□□□ -1.22
SYNE3-205ENST00000557275 TMEM14DPA8MWL7 114 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 YPEL1O60688 119 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 BVES-AS1Q5T3Y7 98 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 YPEL2Q96QA6 119 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 CFPP27918 469 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 K7EMI3 77 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 CXCL10P02778 98 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 IGFBP2P18065 325 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 SHISA4Q96DD7 197 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 IGKV3-20P01619 116 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 MRPL55Q7Z7F7 128 aaKnown RBP7.4□□□□□ -1.22
SYNE3-205ENST00000557275 ANKRD29Q8N6D5 301 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms