RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 IGLV1-40P01703 118 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 IGHG4P01861 327 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 PF4V1P10720 104 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 M6PRP20645 277 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 TPPP2P59282 170 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 B2MP61769 119 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 CFHR3Q02985 330 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 FAM209BQ5JX69 171 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 Q6ZRG5 221 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 STPG3Q8N7X2 389 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 MS4A10Q96PG2 267 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 SLC39A9Q9NUM3 307 aa11.22□□□□□ -0.61
SHMT2-208ENST00000553868 IGKV1OR2-108A0A075B7D4 117 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 PSMB11A5LHX3 300 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 TEX46H3BTG2 121 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 NMBP08949 121 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 IGLC1P0CG04 106 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 RAB2AP61019 212 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 PRR20EP86478 221 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 PRR20CP86479 221 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 PRR20DP86480 221 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 PRR20BP86481 221 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 PRR20AP86496 221 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 PXDC1Q5TGL8 231 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 MIC13Q5XKP0 118 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 COMMD1Q8N668 190 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 BPIFCQ8NFQ6 507 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 FAM213BQ8TBF2 198 aa11.21□□□□□ -0.61
SHMT2-208ENST00000553868 MRPL36Q9P0J6 103 aaKnown RBP11.21□□□□□ -0.61
SHMT2-208ENST00000553868 DNAH7Q8WXX0 4024 aa11.21□□□□□ -0.62
SHMT2-208ENST00000553868 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 MFSD2BA6NFX1 497 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 NUPL2O15504 423 aaKnown RBP11.2□□□□□ -0.62
SHMT2-208ENST00000553868 ELANEP08246 267 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 ZNF616Q08AN1 781 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 FOXE3Q13461 319 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 TMEM95Q3KNT9 176 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 OR10G4Q8NGN3 311 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 OR10G9Q8NGN4 311 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 OR10G7Q8NGN6 311 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 OR1L4Q8NGR5 311 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 ZNF502Q8TBZ5 544 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 RNF2Q99496 336 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 ACTR3CQ9C0K3 210 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-208ENST00000553868 RPRMQ9NS64 109 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
SHMT2-208ENST00000553868 A0A1W2PPV4 95 aa11.19□□□□□ -0.62
SHMT2-208ENST00000553868 HBE1P02100 147 aa11.19□□□□□ -0.62
SHMT2-208ENST00000553868 LINC00869P0C866 280 aa11.19□□□□□ -0.62
SHMT2-208ENST00000553868 YPEL3P61236 119 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-208ENST00000553868 SPSB3Q6PJ21 355 aa11.19□□□□□ -0.62
SHMT2-208ENST00000553868 S100A7AQ86SG5 101 aa11.19□□□□□ -0.62
SHMT2-208ENST00000553868 PFDN5Q99471 154 aa11.19□□□□□ -0.62
SHMT2-208ENST00000553868 PLA2G2EQ9NZK7 142 aa11.19□□□□□ -0.62
SHMT2-208ENST00000553868 PFDN2Q9UHV9 154 aa11.19□□□□□ -0.62
SHMT2-208ENST00000553868 HERC2O95714 4834 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 PCLOQ9Y6V0 5065 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-208ENST00000553868 WI2-2373I1.2A0A1W2PRP0 233 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 NUDT19A8MXV4 375 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 H2AFB1P0C5Y9 115 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 RD3LP0DJH9 198 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 PSMB8P28062 276 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 RAB9AP51151 201 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 RHOBP62745 196 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 TIGITQ495A1 244 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 Q8WTZ3 238 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 GATAD1Q8WUU5 269 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 C16orf95Q9H693 158 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 SERTAD4Q9NUC0 356 aa11.18□□□□□ -0.62
SHMT2-208ENST00000553868 CTXND1A0A1B0GTU2 59 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 COX7A2P2O60397 106 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 YIF1AO95070 293 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 TOMM40O96008 361 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 IGKV1-17P01599 117 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 S100A7P31151 101 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 CDC34P49427 236 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-208ENST00000553868 DEFA5Q01523 94 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 ZNF90Q03938 601 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 FAM122CQ6P4D5 195 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 ZNF329Q86UD4 541 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 RCC1LQ96I51 464 aaKnown RBP11.17□□□□□ -0.62
SHMT2-208ENST00000553868 MED9Q9NWA0 146 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 S4R3C0 116 aa11.17□□□□□ -0.62
SHMT2-208ENST00000553868 LINC00862A6NCI5 91 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 OR2T8A6NH00 312 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 SEC14L6B5MCN3 397 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 HYPMO75409 117 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 IGHV3-23P01764 117 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 CLEC3BP05452 202 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 GPR183P32249 361 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 FHITP49789 147 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 PLP1P60201 277 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 RELQ04864 619 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-208ENST00000553868 CLEC19AQ6UXS0 136 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 ZNF600Q6ZNG1 722 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 RPP25LQ8N5L8 163 aaKnown RBP11.16□□□□□ -0.62
SHMT2-208ENST00000553868 OR4X2Q8NGF9 303 aa11.16□□□□□ -0.62
SHMT2-208ENST00000553868 OR51G1Q8NGK1 321 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms