RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ZNF439Q8NDP4 499 aa1.71□□□□□ -2.14
SYNE2-210ENST00000553455 OR13C4Q8NGS5 318 aa1.71□□□□□ -2.14
SYNE2-210ENST00000553455 RGPD1P0DJD0 1748 aa1.71□□□□□ -2.14
SYNE2-210ENST00000553455 LTN1O94822 1766 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 TRAV26-2A0A0B4J265 109 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 TRBV6-5A0A0K0K1A5 114 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 FAM236DA0A1B0GTK5 79 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 CNIH1O95406 144 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 S100A6P06703 90 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 FAM236CP0DP71 79 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 EIF2B2P49770 351 aaKnown RBP1.7□□□□□ -2.14
SYNE2-210ENST00000553455 QSER1Q2KHR3 1735 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 CCDC88AQ3V6T2 1871 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 PKD1L3Q7Z443 1732 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 MBD3L1Q8WWY6 194 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 C11orf40Q8WZ69 217 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 PRAP1Q96NZ9 151 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 NAA38Q9BRA0 125 aaKnown RBP1.7□□□□□ -2.14
SYNE2-210ENST00000553455 NSD3Q9BZ95 1437 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 ULBP3Q9BZM4 244 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 DOCK5Q9H7D0 1870 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 RREB1Q92766 1687 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 GOLGB1Q14789 3259 aaKnown RBP1.7□□□□□ -2.14
SYNE2-210ENST00000553455 IBTKQ9P2D0 1353 aaPredicted RBP1.7□□□□□ -2.14
SYNE2-210ENST00000553455 RGPD2P0DJD1 1756 aa1.7□□□□□ -2.14
SYNE2-210ENST00000553455 LRRC37A3O60309 1634 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 CICQ96RK0 1608 aaPredicted RBP1.69□□□□□ -2.14
SYNE2-210ENST00000553455 LY75O60449 1722 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 TNS1Q9HBL0 1735 aaKnown RBP1.69□□□□□ -2.14
SYNE2-210ENST00000553455 PCDH15Q96QU1 1955 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 KIF20BQ96Q89 1820 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 WNK3Q9BYP7 1800 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 EXOC1LA0A1B0GW35 172 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 TRAPPC13A5PLN9 417 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 CRPP02741 224 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 ZNF345Q14585 488 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 NNATQ16517 81 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 SPOPLQ6IQ16 392 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 DEFB132Q7Z7B7 95 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 H1FXQ92522 213 aaKnown RBP1.69□□□□□ -2.14
SYNE2-210ENST00000553455 TOMM6Q96B49 74 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 COMMD5Q9GZQ3 224 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 DCSTAMPQ9H295 470 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 TMEM56-RWDD3S4R434 201 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 NHSQ6T4R5 1651 aa1.69□□□□□ -2.14
SYNE2-210ENST00000553455 TAF1LQ8IZX4 1826 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 SCN11AQ9UI33 1791 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 DPRXA6NFQ7 191 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 METTL15P1P0C7V9 234 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 CCL7P80098 99 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 SRSF6Q13247 344 aaKnown RBP1.68□□□□□ -2.14
SYNE2-210ENST00000553455 NDUFA5Q16718 116 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 SPANXN3Q5MJ09 141 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 DEFB119Q8N690 84 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 TERB2Q8NHR7 220 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 PFN4Q8NHR9 129 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 MCFD2Q8NI22 146 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 TMEM106AQ96A25 262 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 TMEM147Q9BVK8 224 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 SLC22A13Q9Y226 551 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 LRP5O75197 1615 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 PAPPAQ13219 1627 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 ROBO3Q96MS0 1386 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 MRC1P22897 1456 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 BTAF1O14981 1849 aa1.68□□□□□ -2.14
SYNE2-210ENST00000553455 RP1L1Q8IWN7 2480 aaPredicted RBP1.67□□□□□ -2.14
SYNE2-210ENST00000553455 SIPA1L3O60292 1781 aaPredicted RBP1.67□□□□□ -2.14
SYNE2-210ENST00000553455 CASZ1Q86V15 1759 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 KDM6AO15550 1401 aaPredicted RBP1.67□□□□□ -2.14
SYNE2-210ENST00000553455 NUP188Q5SRE5 1749 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 TMEM114B3SHH9 223 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 F8W036 122 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 SDCBPO00560 298 aaPredicted RBP1.67□□□□□ -2.14
SYNE2-210ENST00000553455 PMP2P02689 132 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 G6PCP35575 357 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 STX5Q13190 355 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 EDDM3AQ14507 147 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 ELOBQ15370 118 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 IAH1Q2TAA2 248 aaPredicted RBP1.67□□□□□ -2.14
SYNE2-210ENST00000553455 LCN15Q6UWW0 184 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 Q6ZSA8 131 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 BPIFA4PQ86YQ2 179 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 C20orf27Q9GZN8 174 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 CYSTM1Q9H1C7 97 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 PRELID3BQ9Y3B1 194 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 KIF13BQ9NQT8 1826 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 C5P01031 1676 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 UBR2Q8IWV8 1755 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 UBR3Q6ZT12 1888 aa1.67□□□□□ -2.14
SYNE2-210ENST00000553455 NRXN2Q9P2S2 1712 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 TOGARAM1Q9Y4F4 1720 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 TRAV9-1A0A075B6T8 112 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 BUB1B-PAK6H3BSN5 160 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 CRYZL1O95825 349 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 SHBGP04278 402 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 RPSAP08865 295 aaKnown RBP1.66□□□□□ -2.14
SYNE2-210ENST00000553455 CTXN2P0C2S0 81 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 ERVS71-1P61550 626 aa1.66□□□□□ -2.14
SYNE2-210ENST00000553455 C12orf45Q8N5I9 185 aaPredicted RBP1.66□□□□□ -2.14
SYNE2-210ENST00000553455 SCGB3A1Q96QR1 104 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms