RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 VPS29Q9UBQ0 182 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 SLC35A3Q9Y2D2 325 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 PRELID3BQ9Y3B1 194 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 U3KQ87 197 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 RIMBP3CA6NJZ7 1639 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 RIMBP3BA6NNM3 1639 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 RIMBP3Q9UFD9 1639 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 KNTC1P50748 2209 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 hADV38S2A0JD32 116 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 CCDC160A6NGH7 325 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 SERPINA6P08185 405 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 BRMS1LQ5PSV4 323 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 TRAPPC5Q8IUR0 188 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 SLC25A40Q8TBP6 338 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 STAG3L4Q8TBR4 150 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 ITFG2Q969R8 447 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 UTP11Q9Y3A2 253 aaKnown RBP0.28□□□□□ -2.36
GPN3-209ENST00000551079 NAV3Q8IVL0 2385 aa0.28□□□□□ -2.36
GPN3-209ENST00000551079 PIK3C2GO75747 1445 aa0.28□□□□□ -2.37
GPN3-209ENST00000551079 CACNA1EQ15878 2313 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 N4BP2Q86UW6 1770 aaPredicted RBP0.27□□□□□ -2.37
GPN3-209ENST00000551079 NUP98P52948 1817 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 hCG_1818297A0A087WSY0 165 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 A8MT66 165 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 PIRO00625 290 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 KLF7O75840 302 aaPredicted RBP0.27□□□□□ -2.37
GPN3-209ENST00000551079 RNASE4P34096 147 aaKnown RBP0.27□□□□□ -2.37
GPN3-209ENST00000551079 CCDC122Q5T0U0 273 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 LCA10Q71F78 164 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 TEX47Q8TBZ9 253 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 MUC4Q99102 2169 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 APCP25054 2843 aa0.27□□□□□ -2.37
GPN3-209ENST00000551079 MYH2Q9UKX2 1941 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 C7orf71A4D174 169 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 CCL25O15444 150 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 GADD45GO95257 159 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 OR4E1P0C645 316 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 S100A4P26447 101 aaKnown RBP0.26□□□□□ -2.37
GPN3-209ENST00000551079 EFNA4P52798 201 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 YPEL3P61236 119 aaPredicted RBP0.26□□□□□ -2.37
GPN3-209ENST00000551079 PSG9Q00887 426 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 PTRHD1Q6GMV3 140 aaKnown RBP0.26□□□□□ -2.37
GPN3-209ENST00000551079 S100A7AQ86SG5 101 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 DCUN1D1Q96GG9 259 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 ARL5BQ96KC2 179 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.26□□□□□ -2.37
GPN3-209ENST00000551079 CHCHD2Q9Y6H1 151 aaPredicted RBP0.26□□□□□ -2.37
GPN3-209ENST00000551079 MGAMO43451 1857 aa0.26□□□□□ -2.37
GPN3-209ENST00000551079 MYH3P11055 1940 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 PCF11O94913 1555 aaKnown RBP0.25□□□□□ -2.37
GPN3-209ENST00000551079 PLB1Q6P1J6 1458 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 M0R036 132 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 DNAL4O96015 105 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 PRH1P02810 166 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 SERPINE1P05121 402 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 RBP1P09455 135 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 DYNLT1P63172 113 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 ESRGQ1W209 222 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 KRT222Q8N1A0 295 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 GDPD1Q8N9F7 314 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 LINC00301Q8NCQ3 95 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 OR52L1Q8NGH7 329 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 CT55Q8WUE5 264 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 PATE1Q8WXA2 126 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 SLAMF6Q96DU3 332 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 TMEM133Q9H2Q1 129 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 BCL2L10Q9HD36 194 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 TAS2R7Q9NYW3 318 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 NAV2Q8IVL1 2488 aa0.25□□□□□ -2.37
GPN3-209ENST00000551079 MYO3BQ8WXR4 1341 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 A0A087X0T9 212 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 TSNQ15631 228 aaKnown RBP0.24□□□□□ -2.37
GPN3-209ENST00000551079 IAH1Q2TAA2 248 aaPredicted RBP0.24□□□□□ -2.37
GPN3-209ENST00000551079 GKN2Q86XP6 184 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 OR6V1Q8N148 313 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 OR51A2Q8NGJ7 313 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 PRAP1Q96NZ9 151 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 HIST1H2BLQ99880 126 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 CCDC90BQ9GZT6 254 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 C14orf132Q9NPU4 83 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 MYLKQ15746 1914 aa0.24□□□□□ -2.37
GPN3-209ENST00000551079 TRBV6-4A0A1B0GX49 114 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 CYB5BO43169 146 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 CD2P06729 351 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 CYBAP13498 195 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 CASP1P29466 404 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 HOXA6P31267 233 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 FAM74A1Q5RGS3 127 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 Q6Q795 121 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 LINC00322Q6ZN03 302 aaPredicted RBP0.23□□□□□ -2.37
GPN3-209ENST00000551079 PPP1R14BQ96C90 147 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 DGCR14Q96DF8 476 aaKnown RBP0.23□□□□□ -2.37
GPN3-209ENST00000551079 SMR3AQ99954 134 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 PRADC1Q9BSG0 188 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 C6orf62Q9GZU0 229 aaPredicted RBP0.23□□□□□ -2.37
GPN3-209ENST00000551079 TLNRD1Q9H1K6 362 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 PARVGQ9HBI0 331 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 MAST4O15021 2626 aa0.23□□□□□ -2.37
GPN3-209ENST00000551079 UBR2Q8IWV8 1755 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 TRAV4A0A0B4J268 109 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms