RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ZNF688P0C7X2 276 aa7.19□□□□□ -1.26
HDAC7-229ENST00000549883 GPX4P36969 197 aaPredicted RBP7.19□□□□□ -1.26
HDAC7-229ENST00000549883 IFITM3Q01628 133 aa7.19□□□□□ -1.26
HDAC7-229ENST00000549883 COQ8AQ8NI60 647 aa7.19□□□□□ -1.26
HDAC7-229ENST00000549883 MITD1Q8WV92 249 aa7.19□□□□□ -1.26
HDAC7-229ENST00000549883 SLC35E1Q96K37 410 aa7.19□□□□□ -1.26
HDAC7-229ENST00000549883 PBDC1Q9BVG4 233 aa7.19□□□□□ -1.26
HDAC7-229ENST00000549883 NUDT15Q9NV35 164 aa7.19□□□□□ -1.26
HDAC7-229ENST00000549883 A0A1W2PS18 150 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 PMS2P5A8MQ11 134 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 SPRY2O43597 315 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 BUB3O43684 328 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 MED6O75586 246 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 SCGB1D2O95969 90 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 GATA2P23769 480 aaPredicted RBP7.18□□□□□ -1.26
HDAC7-229ENST00000549883 BMI1P35226 326 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 NKX2-1P43699 371 aaPredicted RBP7.18□□□□□ -1.26
HDAC7-229ENST00000549883 APOC4P55056 127 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 ATP5IP56385 69 aaPredicted RBP7.18□□□□□ -1.26
HDAC7-229ENST00000549883 DEFB1P60022 68 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 LYZP61626 148 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 RAB11AP62491 216 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 PAFAH1B2P68402 229 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 IAH1Q2TAA2 248 aaPredicted RBP7.18□□□□□ -1.26
HDAC7-229ENST00000549883 ZBTB8BQ8NAP8 495 aaPredicted RBP7.18□□□□□ -1.26
HDAC7-229ENST00000549883 RNF183Q96D59 192 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 RNF125Q96EQ8 232 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 CCDC32Q9BV29 185 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 TMEM231Q9H6L2 316 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 GSKIPQ9P0R6 139 aa7.18□□□□□ -1.26
HDAC7-229ENST00000549883 RCL1Q9Y2P8 373 aaKnown RBP7.18□□□□□ -1.26
HDAC7-229ENST00000549883 TRAV2A0A0B4J234 112 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 PIGBOS1A0A0B4J2F0 54 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 KIR2DL5BA0A0G2JN68 375 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 KIR2DL5BA0A0G2JPC4 375 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 A0A0J9YWU9 116 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 SCGB2A1O75556 95 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 IFNA21P01568 189 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 MBPP02686 304 aaPredicted RBP7.17□□□□□ -1.26
HDAC7-229ENST00000549883 GIG44P09565 113 aaPredicted RBP7.17□□□□□ -1.26
HDAC7-229ENST00000549883 ARL16Q0P5N6 197 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 OR8G2PQ6IF36 304 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 ACOT7LQ6ZUV0 252 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 Q6ZWC4 215 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 KIR2DL5AQ8N109 375 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 THAP8Q8NA92 274 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 KIR2DL5BQ8NHK3 375 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 GRAMD2BQ96HH9 432 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 CIB3Q96Q77 187 aaPredicted RBP7.17□□□□□ -1.26
HDAC7-229ENST00000549883 TRGV9Q99603 122 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 WDR12Q9GZL7 423 aaKnown RBP7.17□□□□□ -1.26
HDAC7-229ENST00000549883 CSTL1Q9H114 145 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 PSENENQ9NZ42 101 aa7.17□□□□□ -1.26
HDAC7-229ENST00000549883 STRAPQ9Y3F4 350 aaKnown RBP7.17□□□□□ -1.26
HDAC7-229ENST00000549883 CD5P06127 495 aa7.16□□□□□ -1.26
HDAC7-229ENST00000549883 H2AFB2P0C5Z0 115 aa7.16□□□□□ -1.26
HDAC7-229ENST00000549883 METTL15P1P0C7V9 234 aa7.16□□□□□ -1.26
HDAC7-229ENST00000549883 EIF2B2P49770 351 aaKnown RBP7.16□□□□□ -1.26
HDAC7-229ENST00000549883 RRAS2P62070 204 aaPredicted RBP7.16□□□□□ -1.26
HDAC7-229ENST00000549883 SIGLEC15Q6ZMC9 328 aa7.16□□□□□ -1.26
HDAC7-229ENST00000549883 ZNF431Q8TF32 576 aaPredicted RBP7.16□□□□□ -1.26
HDAC7-229ENST00000549883 NARS2Q96I59 477 aaKnown RBP7.16□□□□□ -1.26
HDAC7-229ENST00000549883 SMIM8Q96KF7 97 aa7.16□□□□□ -1.26
HDAC7-229ENST00000549883 C17orf77Q96MU5 243 aa7.16□□□□□ -1.26
HDAC7-229ENST00000549883 FAM240BA0A1B0GVZ2 78 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 SMCO3A2RU48 225 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 C7orf66A4D0T2 115 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 HELTA6NFD8 242 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 SNRPGP15A8MWD9 76 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 FAM25EA8MYX2 175 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 UBE2CO00762 179 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 UPK1BO75841 260 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 C4BPBP20851 252 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 CMC4P56277 68 aaPredicted RBP7.15□□□□□ -1.26
HDAC7-229ENST00000549883 AKR1C1Q04828 323 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 ASAH1Q13510 395 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 PSMG4Q5JS54 123 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 ACTL10Q5JWF8 245 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 TMEM14EPQ6UXP3 125 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 TRPT1Q86TN4 253 aaKnown RBP7.15□□□□□ -1.26
HDAC7-229ENST00000549883 S100ZQ8WXG8 99 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 C11orf1Q9H5F2 150 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 PTTG2Q9NZH5 202 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 DOK5Q9P104 306 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 TP53TG1Q9Y2A0 90 aa7.15□□□□□ -1.26
HDAC7-229ENST00000549883 DNAH7Q8WXX0 4024 aa7.15□□□□□ -1.27
HDAC7-229ENST00000549883 DEFB4AO15263 64 aa7.14□□□□□ -1.27
HDAC7-229ENST00000549883 CA1P00915 261 aaPredicted RBP7.14□□□□□ -1.27
HDAC7-229ENST00000549883 RPP30P78346 268 aaKnown RBP7.14□□□□□ -1.27
HDAC7-229ENST00000549883 GDF5OSQ5U4N7 250 aa7.14□□□□□ -1.27
HDAC7-229ENST00000549883 LINC00299Q6ZSB3 139 aa7.14□□□□□ -1.27
HDAC7-229ENST00000549883 C12orf45Q8N5I9 185 aaPredicted RBP7.14□□□□□ -1.27
HDAC7-229ENST00000549883 IL17DQ8TAD2 202 aa7.14□□□□□ -1.27
HDAC7-229ENST00000549883 RAB40CQ96S21 281 aa7.14□□□□□ -1.27
HDAC7-229ENST00000549883 SLC25A32Q9H2D1 315 aa7.14□□□□□ -1.27
HDAC7-229ENST00000549883 NRN1Q9NPD7 142 aa7.14□□□□□ -1.27
HDAC7-229ENST00000549883 CLEC5AQ9NY25 188 aa7.14□□□□□ -1.27
HDAC7-229ENST00000549883 STARD9Q9P2P6 4700 aa7.14□□□□□ -1.27
HDAC7-229ENST00000549883 LSM5Q9Y4Y9 91 aaKnown RBP7.14□□□□□ -1.27
HDAC7-229ENST00000549883 CSMD3Q7Z407 3707 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms