RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MCRIP2Q9BUT9 160 aaKnown RBP11□□□□□ -0.65
PRPF40B-209ENST00000548825 POLR3KQ9Y2Y1 108 aaPredicted RBP11□□□□□ -0.65
PRPF40B-209ENST00000548825 A6NNC1 897 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 GCGP01275 180 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 TMEM11P17152 192 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 RBPJQ06330 500 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 PRNTQ86SH4 94 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 VAMP8Q9BV40 100 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 ZNF257Q9Y2Q1 563 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 IGHV3OR16-13A0A075B7E8 117 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 IGHV3-74A0A0B4J1X5 117 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 A8MWP6 167 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 CASP6P55212 293 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 ZNF600Q6ZNG1 722 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 ZNF833PQ6ZTB9 187 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 OR5AN1Q8NGI8 311 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 PEX7O00628 323 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 APCSP02743 223 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 RPL19P84098 196 aaKnown RBP10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 Q71RC1 249 aaPredicted RBP10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 TMEM186Q96B77 213 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 TMEM133Q9H2Q1 129 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 IGHV2-26A0A0B4J1V2 119 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 SH2D7A6NKC9 451 aaPredicted RBP10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 HIGD1CA8MV81 97 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 HSBP1O75506 76 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 TEX36Q5VZQ5 186 aa10.99□□□□□ -0.65
PRPF40B-209ENST00000548825 CRYBG3Q68DQ2 2970 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 C22orf46C9J442 243 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 DIRC3C9JPN6 131 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 NBEAP1P0C6P0 100 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 SLAQ13239 276 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 TBR1Q16650 682 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 Q56UQ5 140 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 OR5R1Q8NH85 324 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 ZNF586Q9NXT0 402 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 RNF114Q9Y508 228 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 PTPN13Q12923 2485 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 TYMSP04818 313 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 CD99P14209 185 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 GOLT1AQ6ZVE7 132 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 TP53TG3Q9ULZ0 132 aa10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 USP9XQ93008 2570 aaPredicted RBP10.98□□□□□ -0.65
PRPF40B-209ENST00000548825 TCRBV4S1A1TA0A5B7 111 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 CGB1A6NKQ9 187 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 SHISA9B4DS77 424 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 HYPMO75409 117 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 NUP37Q8NFH4 326 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 RAXQ9Y2V3 346 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 TIMM23O14925 209 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 TFPI2P48307 235 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 ZNF138P52744 262 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 MEF2CQ06413 473 aaPredicted RBP10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 OR1L4Q8NGR5 311 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 TXNDC17Q9BRA2 123 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 SELENOKQ9Y6D0 94 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 CDSNQ15517 529 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 IGFL4Q6B9Z1 124 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 CIARTQ8N365 385 aaPredicted RBP10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 ST6GALNAC6Q969X2 333 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 BORCS7Q96B45 105 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 TXN2Q99757 166 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 CDC42EP3Q9UKI2 254 aa10.97□□□□□ -0.65
PRPF40B-209ENST00000548825 NDUFS7O75251 213 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 APOBEC3AP31941 199 aaPredicted RBP10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 BRS3P32247 399 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 MAJINQ3KP22 176 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 TMEM177Q53S58 311 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 PPP1R27Q86WC6 154 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 TMEM167AQ8TBQ9 72 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 FAM167A-AS1Q96KT0 104 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 C17orf77Q96MU5 243 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 NEU1Q99519 415 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 FBXL7Q9UJT9 491 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 SORL1Q92673 2214 aa10.96□□□□□ -0.65
PRPF40B-209ENST00000548825 PSG1P11464 419 aa10.96□□□□□ -0.66
PRPF40B-209ENST00000548825 PRRX1P54821 245 aa10.96□□□□□ -0.66
PRPF40B-209ENST00000548825 SRSF12Q8WXF0 261 aaKnown RBP10.96□□□□□ -0.66
PRPF40B-209ENST00000548825 RASL11BQ9BPW5 248 aa10.96□□□□□ -0.66
PRPF40B-209ENST00000548825 HRNRQ86YZ3 2850 aaPredicted RBP10.96□□□□□ -0.66
PRPF40B-209ENST00000548825 IGHV1-3A0A0C4DH29 117 aa10.96□□□□□ -0.66
PRPF40B-209ENST00000548825 AARDQ4LEZ3 155 aa10.96□□□□□ -0.66
PRPF40B-209ENST00000548825 NDUFAF3Q9BU61 184 aa10.96□□□□□ -0.66
PRPF40B-209ENST00000548825 NRN1Q9NPD7 142 aa10.96□□□□□ -0.66
PRPF40B-209ENST00000548825 MYO9AB2RTY4 2548 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 TCAPO15273 167 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 TDGF1P3P51864 188 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 PERPQ96FX8 193 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 PMCHL2Q9BQD1 86 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 CLEC7AQ9BXN2 247 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 IGHV3OR16-10A0A075B7F0 116 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 COL8A1P27658 744 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 FCGR2BP31994 310 aaPredicted RBP10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 TMEM155Q4W5P6 130 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 SNHG12Q9BXW3 62 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 LRRK2Q5S007 2527 aa10.95□□□□□ -0.66
PRPF40B-209ENST00000548825 IGHV3-49A0A0A0MS15 119 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 A0A1W2PRE2 83 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms