RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 E7EQL1 145 aa18.66■□□□□ 0.58
FOXA1-202ENST00000545425 LINC00305Q7Z4B0 112 aa18.66■□□□□ 0.58
FOXA1-202ENST00000545425 KCNS1Q96KK3 526 aa18.66■□□□□ 0.58
FOXA1-202ENST00000545425 WFIKKN1Q96NZ8 548 aa18.66■□□□□ 0.58
FOXA1-202ENST00000545425 HSPB9Q9BQS6 159 aa18.66■□□□□ 0.58
FOXA1-202ENST00000545425 HIVEP3Q5T1R4 2406 aa18.66■□□□□ 0.58
FOXA1-202ENST00000545425 PLCE1Q9P212 2302 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 GPX1P07203 203 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 CD3EP07766 207 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 MRGPRG-AS1Q2M3A8 158 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 CT83Q5H943 113 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 VKORC1Q9BQB6 163 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 GNB4Q9HAV0 340 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 SERTAD4Q9NUC0 356 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 SOX21Q9Y651 276 aaPredicted RBP18.65■□□□□ 0.58
FOXA1-202ENST00000545425 HYPMO75409 117 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 IGLV1-47P01700 117 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 APCSP02743 223 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 TPTE2P1Q5T6R2 138 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 MORN5Q5VZ52 161 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 DMRTC2Q8IXT2 367 aaPredicted RBP18.65■□□□□ 0.58
FOXA1-202ENST00000545425 C11orf42Q8N5U0 333 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 EPDR1Q9UM22 224 aa18.65■□□□□ 0.58
FOXA1-202ENST00000545425 TNCP24821 2201 aa18.64■□□□□ 0.57
FOXA1-202ENST00000545425 A0A1B0GUS0 222 aa18.64■□□□□ 0.57
FOXA1-202ENST00000545425 M0R143 59 aa18.64■□□□□ 0.57
FOXA1-202ENST00000545425 UBE2G1P62253 170 aa18.64■□□□□ 0.57
FOXA1-202ENST00000545425 FAM162BQ5T6X4 162 aa18.64■□□□□ 0.57
FOXA1-202ENST00000545425 CLEC7AQ9BXN2 247 aa18.64■□□□□ 0.57
FOXA1-202ENST00000545425 SPTAN1Q13813 2472 aaKnown RBP18.64■□□□□ 0.57
FOXA1-202ENST00000545425 DIAPH2-AS1Q14236 149 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 FXYD3Q14802 87 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 C10orf55Q5SWW7 151 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 TOMM20LQ6UXN7 152 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 C8orf46Q8TAG6 207 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 TSKUQ8WUA8 353 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 SIGLEC9Q9Y336 463 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 IGHV2-26A0A0B4J1V2 119 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 PYYP10082 97 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 C19orf35Q6ZS72 473 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 C5orf17Q8NAS9 161 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 FMC1Q96HJ9 113 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 ZNF492Q9P255 531 aa18.63■□□□□ 0.57
FOXA1-202ENST00000545425 F11RQ9Y624 299 aaKnown RBP18.63■□□□□ 0.57
FOXA1-202ENST00000545425 DOPEY1Q5JWR5 2465 aa18.62■□□□□ 0.57
FOXA1-202ENST00000545425 A0A1B0GV90 55 aa18.62■□□□□ 0.57
FOXA1-202ENST00000545425 ENSAO43768 121 aaKnown RBP18.62■□□□□ 0.57
FOXA1-202ENST00000545425 SSBP2P81877 361 aaPredicted RBP18.62■□□□□ 0.57
FOXA1-202ENST00000545425 OR4B1Q8NGF8 309 aa18.62■□□□□ 0.57
FOXA1-202ENST00000545425 MISP3Q96FF7 219 aa18.62■□□□□ 0.57
FOXA1-202ENST00000545425 GPR82Q96P67 336 aa18.62■□□□□ 0.57
FOXA1-202ENST00000545425 ATG101Q9BSB4 218 aa18.62■□□□□ 0.57
FOXA1-202ENST00000545425 RNF24Q9Y225 148 aa18.62■□□□□ 0.57
FOXA1-202ENST00000545425 BMPR1BO00238 502 aa18.61■□□□□ 0.57
FOXA1-202ENST00000545425 ZNF253O75346 499 aa18.61■□□□□ 0.57
FOXA1-202ENST00000545425 RNF224P0DH78 156 aa18.61■□□□□ 0.57
FOXA1-202ENST00000545425 TMEM14CQ9P0S9 112 aa18.61■□□□□ 0.57
FOXA1-202ENST00000545425 INSIG2Q9Y5U4 225 aa18.61■□□□□ 0.57
FOXA1-202ENST00000545425 SPTBN1Q01082 2364 aaKnown RBP18.61■□□□□ 0.57
FOXA1-202ENST00000545425 OR2J3O76001 311 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 TNXAQ16473 311 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 CYB5R2Q6BCY4 276 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 MIEN1Q9BRT3 115 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 C22orf46C9J442 243 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 BUB1B-PAK6H3BSN5 160 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 TOMM40O96008 361 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 NBEAP1P0C6P0 100 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 KLF5Q13887 457 aaPredicted RBP18.6■□□□□ 0.57
FOXA1-202ENST00000545425 FBXL19-AS1Q494R0 122 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 PPP1R27Q86WC6 154 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 NUDT10Q8NFP7 164 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 NUDT11Q96G61 164 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 VAMP8Q9BV40 100 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 C7orf69Q9H7B7 122 aa18.6■□□□□ 0.57
FOXA1-202ENST00000545425 IGHV1-3A0A0C4DH29 117 aa18.59■□□□□ 0.57
FOXA1-202ENST00000545425 TRBV6-1A0A0K0K1D8 114 aa18.59■□□□□ 0.57
FOXA1-202ENST00000545425 FAM231BA6NCW3 169 aa18.59■□□□□ 0.57
FOXA1-202ENST00000545425 ZNF324O75467 553 aaPredicted RBP18.59■□□□□ 0.57
FOXA1-202ENST00000545425 SLC25A5P05141 298 aaKnown RBP18.59■□□□□ 0.57
FOXA1-202ENST00000545425 ZGRF1Q86YA3 2104 aa18.59■□□□□ 0.57
FOXA1-202ENST00000545425 CCL21O00585 134 aa18.58■□□□□ 0.57
FOXA1-202ENST00000545425 RAB4AP20338 218 aa18.58■□□□□ 0.57
FOXA1-202ENST00000545425 SRIP30626 198 aa18.58■□□□□ 0.57
FOXA1-202ENST00000545425 TCL1AP56279 114 aa18.58■□□□□ 0.57
FOXA1-202ENST00000545425 MRPL54Q6P161 138 aaKnown RBP18.58■□□□□ 0.57
FOXA1-202ENST00000545425 OR1B1Q8NGR6 318 aa18.58■□□□□ 0.57
FOXA1-202ENST00000545425 GFRA4Q9GZZ7 299 aa18.58■□□□□ 0.57
FOXA1-202ENST00000545425 TPSG1Q9NRR2 321 aa18.58■□□□□ 0.57
FOXA1-202ENST00000545425 MRPL36Q9P0J6 103 aaKnown RBP18.58■□□□□ 0.57
FOXA1-202ENST00000545425 NUTF2P61970 127 aaKnown RBP18.58■□□□□ 0.56
FOXA1-202ENST00000545425 MLST8Q9BVC4 326 aa18.58■□□□□ 0.56
FOXA1-202ENST00000545425 GP9P14770 177 aa18.57■□□□□ 0.56
FOXA1-202ENST00000545425 ORM2P19652 201 aa18.57■□□□□ 0.56
FOXA1-202ENST00000545425 AMTP48728 403 aa18.57■□□□□ 0.56
FOXA1-202ENST00000545425 DMRTA1Q5VZB9 504 aa18.57■□□□□ 0.56
FOXA1-202ENST00000545425 S100A7AQ86SG5 101 aa18.57■□□□□ 0.56
FOXA1-202ENST00000545425 TMEM68Q96MH6 324 aa18.57■□□□□ 0.56
FOXA1-202ENST00000545425 HIGD1AQ9Y241 93 aa18.57■□□□□ 0.56
FOXA1-202ENST00000545425 TBL2Q9Y4P3 447 aaKnown RBP18.57■□□□□ 0.56
FOXA1-202ENST00000545425 A0A1W2PS18 150 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms