RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 NUTF2P61970 127 aaKnown RBP12.92□□□□□ -0.34
PCF11-206ENST00000533018 OR51G1Q8NGK1 321 aa12.92□□□□□ -0.34
PCF11-206ENST00000533018 OR1S1Q8NH92 325 aa12.92□□□□□ -0.34
PCF11-206ENST00000533018 HRH4Q9H3N8 390 aa12.92□□□□□ -0.34
PCF11-206ENST00000533018 RBKSQ9H477 322 aa12.92□□□□□ -0.34
PCF11-206ENST00000533018 A0A0B4J2A0 478 aa12.91□□□□□ -0.34
PCF11-206ENST00000533018 FABP12A6NFH5 140 aa12.91□□□□□ -0.34
PCF11-206ENST00000533018 ZFP92A6NM28 416 aa12.91□□□□□ -0.34
PCF11-206ENST00000533018 ZNF705EA8MWA4 302 aaPredicted RBP12.91□□□□□ -0.34
PCF11-206ENST00000533018 FAM90A26D6RGX4 464 aa12.91□□□□□ -0.34
PCF11-206ENST00000533018 BUB3O43684 328 aa12.91□□□□□ -0.34
PCF11-206ENST00000533018 TMBIM6P55061 237 aa12.91□□□□□ -0.34
PCF11-206ENST00000533018 KLF9Q13886 244 aaPredicted RBP12.91□□□□□ -0.34
PCF11-206ENST00000533018 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
PCF11-206ENST00000533018 SHPKQ9UHJ6 478 aa12.91□□□□□ -0.34
PCF11-206ENST00000533018 X6R8D5 127 aa12.91□□□□□ -0.34
PCF11-206ENST00000533018 PRR20EP86478 221 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 PRR20CP86479 221 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 PRR20DP86480 221 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 PRR20BP86481 221 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 PRR20AP86496 221 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 Q6ZTC4 211 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 RNF125Q96EQ8 232 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 C1QTNF4Q9BXJ3 329 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 XCL2Q9UBD3 114 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 PFDN2Q9UHV9 154 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 APLNQ9ULZ1 77 aa12.9□□□□□ -0.34
PCF11-206ENST00000533018 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
PCF11-206ENST00000533018 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
PCF11-206ENST00000533018 SUPT4H1P63272 117 aaKnown RBP12.89□□□□□ -0.35
PCF11-206ENST00000533018 SRPXP78539 464 aa12.89□□□□□ -0.35
PCF11-206ENST00000533018 TMED4Q7Z7H5 227 aa12.89□□□□□ -0.35
PCF11-206ENST00000533018 CSNK1G2-AS1Q8NCQ2 148 aa12.89□□□□□ -0.35
PCF11-206ENST00000533018 SLC35E1Q96K37 410 aa12.89□□□□□ -0.35
PCF11-206ENST00000533018 BCL7BQ9BQE9 202 aa12.89□□□□□ -0.35
PCF11-206ENST00000533018 PAIP2BQ9ULR5 123 aaKnown RBP12.89□□□□□ -0.35
PCF11-206ENST00000533018 TNFSF8P32971 234 aa12.88□□□□□ -0.35
PCF11-206ENST00000533018 FAUP35544 74 aaKnown RBP12.88□□□□□ -0.35
PCF11-206ENST00000533018 NUP62P37198 522 aaPredicted RBP12.88□□□□□ -0.35
PCF11-206ENST00000533018 MCFD2Q8NI22 146 aa12.88□□□□□ -0.35
PCF11-206ENST00000533018 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
PCF11-206ENST00000533018 SEPSECSQ9HD40 501 aaKnown RBP12.88□□□□□ -0.35
PCF11-206ENST00000533018 H3BMM0 161 aa12.87□□□□□ -0.35
PCF11-206ENST00000533018 IGKV3-20P01619 116 aa12.87□□□□□ -0.35
PCF11-206ENST00000533018 GPX4P36969 197 aaPredicted RBP12.87□□□□□ -0.35
PCF11-206ENST00000533018 LYZP61626 148 aa12.87□□□□□ -0.35
PCF11-206ENST00000533018 ZNF90Q03938 601 aa12.87□□□□□ -0.35
PCF11-206ENST00000533018 GAMTQ14353 236 aa12.87□□□□□ -0.35
PCF11-206ENST00000533018 ZNF767PQ75MW2 155 aa12.87□□□□□ -0.35
PCF11-206ENST00000533018 PPP1R14BQ96C90 147 aa12.87□□□□□ -0.35
PCF11-206ENST00000533018 SLIRPQ9GZT3 109 aaKnown RBP12.87□□□□□ -0.35
PCF11-206ENST00000533018 IGHV4-4A0A075B6R2 117 aa12.86□□□□□ -0.35
PCF11-206ENST00000533018 PIGBOS1A0A0B4J2F0 54 aa12.86□□□□□ -0.35
PCF11-206ENST00000533018 FABP1P07148 127 aa12.86□□□□□ -0.35
PCF11-206ENST00000533018 ATP5IP56385 69 aaPredicted RBP12.86□□□□□ -0.35
PCF11-206ENST00000533018 PYDC2Q56P42 97 aa12.86□□□□□ -0.35
PCF11-206ENST00000533018 TOMM5Q8N4H5 51 aa12.86□□□□□ -0.35
PCF11-206ENST00000533018 CELA1Q9UNI1 258 aa12.86□□□□□ -0.35
PCF11-206ENST00000533018 SNRPGP15A8MWD9 76 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 H3BMQ9 156 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 IAPPP10997 89 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 VAMP1P23763 118 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 ID1P41134 155 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 NKX2-1P43699 371 aaPredicted RBP12.85□□□□□ -0.35
PCF11-206ENST00000533018 RAB11AP62491 216 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 OR2F1Q13607 317 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 OR8G2PQ6IF36 304 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 COQ8AQ8NI60 647 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
PCF11-206ENST00000533018 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 DEFB131BA0A096LNP1 70 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 FXYD7P58549 80 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 AP3S2P59780 193 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 DEFB1P60022 68 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 C12orf74Q32Q52 190 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 TMEM128Q5BJH2 165 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 GDF5OSQ5U4N7 250 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 OR4B1Q8NGF8 309 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 SOSTQ9BQB4 213 aa12.84□□□□□ -0.35
PCF11-206ENST00000533018 WDR12Q9GZL7 423 aaKnown RBP12.84□□□□□ -0.35
PCF11-206ENST00000533018 DNAH6Q9C0G6 4158 aa12.83□□□□□ -0.36
PCF11-206ENST00000533018 IGKV1D-37A0A075B6S9 117 aa12.83□□□□□ -0.36
PCF11-206ENST00000533018 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.36
PCF11-206ENST00000533018 EMP1P54849 157 aa12.83□□□□□ -0.36
PCF11-206ENST00000533018 GSG1LQ6UXU4 331 aa12.83□□□□□ -0.36
PCF11-206ENST00000533018 OR8I2Q8N0Y5 310 aa12.83□□□□□ -0.36
PCF11-206ENST00000533018 MED6O75586 246 aa12.82□□□□□ -0.36
PCF11-206ENST00000533018 C1orf194Q5T5A4 169 aa12.82□□□□□ -0.36
PCF11-206ENST00000533018 RNF126Q9BV68 326 aa12.82□□□□□ -0.36
PCF11-206ENST00000533018 SAV1Q9H4B6 383 aaPredicted RBP12.82□□□□□ -0.36
PCF11-206ENST00000533018 HECTD4Q9Y4D8 3996 aa12.81□□□□□ -0.36
PCF11-206ENST00000533018 CCDC160A6NGH7 325 aa12.81□□□□□ -0.36
PCF11-206ENST00000533018 PITX3O75364 302 aa12.81□□□□□ -0.36
PCF11-206ENST00000533018 PSMB3P49720 205 aa12.81□□□□□ -0.36
PCF11-206ENST00000533018 RPP30P78346 268 aaKnown RBP12.81□□□□□ -0.36
PCF11-206ENST00000533018 FOXI2Q6ZQN5 318 aa12.81□□□□□ -0.36
PCF11-206ENST00000533018 TRGV9Q99603 122 aa12.81□□□□□ -0.36
PCF11-206ENST00000533018 MAGT1Q9H0U3 335 aa12.81□□□□□ -0.36
PCF11-206ENST00000533018 WRBO00258 174 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms