RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 IGHV4-61A0A0C4DH41 118 aa13.71□□□□□ -0.22
PCDHA6-202ENST00000527624 K7EN84 100 aa13.71□□□□□ -0.22
PCDHA6-202ENST00000527624 AMBPP02760 352 aa13.71□□□□□ -0.22
PCDHA6-202ENST00000527624 SAA4P35542 130 aa13.71□□□□□ -0.22
PCDHA6-202ENST00000527624 ATP5J2P56134 94 aa13.71□□□□□ -0.22
PCDHA6-202ENST00000527624 SELENOTP62341 195 aa13.71□□□□□ -0.22
PCDHA6-202ENST00000527624 PIMREGQ9BSJ6 248 aa13.71□□□□□ -0.22
PCDHA6-202ENST00000527624 PRDM13Q9H4Q3 707 aa13.71□□□□□ -0.22
PCDHA6-202ENST00000527624 ZNF355PQ9NSJ1 428 aa13.71□□□□□ -0.22
PCDHA6-202ENST00000527624 TRAV20A0A0B4J274 112 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 TMEM11P17152 192 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 ORM2P19652 201 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 FAM120AOSQ5T036 256 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 AJUBAQ96IF1 538 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 FAM167A-AS1Q96KT0 104 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 MRPL32Q9BYC8 188 aaKnown RBP13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 GOSR1O95249 250 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 RD3LP0DJH9 198 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 BPIFB3P59826 476 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 CX3CL1P78423 397 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 KLF17Q5JT82 389 aaPredicted RBP13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 ZNF843Q8N446 348 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 Q8N6K4 173 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 OR5AU1Q8NGC0 362 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 OR1L4Q8NGR5 311 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 NRGNQ92686 78 aa13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 TBL2Q9Y4P3 447 aaKnown RBP13.7□□□□□ -0.22
PCDHA6-202ENST00000527624 CRYBG3Q68DQ2 2970 aa13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 FAM208BQ5VWN6 2430 aa13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 I3L2K1 104 aa13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 NDPQ00604 133 aa13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 OR1B1Q8NGR6 318 aa13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 C10orf105Q8TEF2 133 aa13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 TRGV9Q99603 122 aa13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 SPOCK3Q9BQ16 436 aa13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 SRSF8Q9BRL6 282 aaKnown RBP13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 TRAPPC1Q9Y5R8 145 aa13.69□□□□□ -0.22
PCDHA6-202ENST00000527624 PYYP10082 97 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 CNN1P51911 297 aaKnown RBP13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 UBE2L3P68036 154 aaKnown RBP13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 PERPQ96FX8 193 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 RNF2Q99496 336 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 ABCA2Q9BZC7 2435 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 IGHV3OR16-10A0A075B7F0 116 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 SNRPCP09234 159 aaKnown RBP13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 CLEC2AQ6UVW9 174 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 LINC00305Q7Z4B0 112 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 ARPC1AQ92747 370 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 LRRK2Q5S007 2527 aa13.68□□□□□ -0.22
PCDHA6-202ENST00000527624 HELTA6NFD8 242 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 CRYBB3P26998 211 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 EBI3Q14213 229 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 MAP1AP78559 2803 aaPredicted RBP13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 IGHV4-30-2A0A087WSY4 118 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 GGTLC3B5MD39 225 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 FAM106CPP0CH98 169 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 JOSD1Q15040 202 aaPredicted RBP13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 ASPHD1Q5U4P2 390 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 ZNF562Q6V9R5 426 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 IL36BQ9NZH7 164 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 S4R3C0 116 aa13.67□□□□□ -0.22
PCDHA6-202ENST00000527624 CENPVL3A0A0U1RRI6 287 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 K7EIM0 57 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 SLC17A3O00476 420 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 NPFFO15130 113 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 IGLC1P0CG04 106 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 OR5R1Q8NH85 324 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 TRAV9-1A0A075B6T8 112 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 A0A1W2PRE2 83 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 A1L4Q6 167 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 GNG4P50150 75 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 YPEL3P61236 119 aaPredicted RBP13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 CENPWQ5EE01 88 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 PAXXQ9BUH6 204 aa13.66□□□□□ -0.22
PCDHA6-202ENST00000527624 SUMO1P63165 101 aaKnown RBP13.65□□□□□ -0.22
PCDHA6-202ENST00000527624 TIGITQ495A1 244 aa13.65□□□□□ -0.22
PCDHA6-202ENST00000527624 C9orf152Q5JTZ5 239 aa13.65□□□□□ -0.22
PCDHA6-202ENST00000527624 VWC2LB2RUY7 222 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 GZMBP10144 247 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 ERVFC1-1P60608 527 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 Q8N9W7 124 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 RBM14Q96PK6 669 aaKnown RBP13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 POLR3KQ9Y2Y1 108 aaPredicted RBP13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 HYPMO75409 117 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 PSG1P11464 419 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 BRS3P32247 399 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 PAX8Q06710 450 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 SRSF1Q07955 248 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 OR5I1Q13606 314 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 FAM209BQ5JX69 171 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 LEMD1Q68G75 181 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 RASL11BQ9BPW5 248 aa13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 ZMAT5Q9UDW3 170 aaKnown RBP13.64□□□□□ -0.23
PCDHA6-202ENST00000527624 NDUFS8O00217 210 aa13.63□□□□□ -0.23
PCDHA6-202ENST00000527624 LYZP61626 148 aa13.63□□□□□ -0.23
PCDHA6-202ENST00000527624 TMEM18Q96B42 140 aa13.63□□□□□ -0.23
PCDHA6-202ENST00000527624 V9GYV3 84 aa13.63□□□□□ -0.23
PCDHA6-202ENST00000527624 IGHV7-81A0A0B4J1V7 117 aa13.63□□□□□ -0.23
PCDHA6-202ENST00000527624 IGKV1-17P01599 117 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms