RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
CCS-203ENST00000526058 C16orf54Q6UWD8 224 aa12.53□□□□□ -0.4
CCS-203ENST00000526058 KIR2DL5AQ8N109 375 aa12.53□□□□□ -0.4
CCS-203ENST00000526058 OR51G1Q8NGK1 321 aa12.53□□□□□ -0.4
CCS-203ENST00000526058 KIR2DL5BQ8NHK3 375 aa12.53□□□□□ -0.4
CCS-203ENST00000526058 GRAMD2BQ96HH9 432 aa12.53□□□□□ -0.4
CCS-203ENST00000526058 CIB3Q96Q77 187 aaPredicted RBP12.53□□□□□ -0.4
CCS-203ENST00000526058 PLECQ15149 4684 aaKnown RBP12.53□□□□□ -0.4
CCS-203ENST00000526058 K7EQG2 157 aa12.52□□□□□ -0.41
CCS-203ENST00000526058 ID3Q02535 119 aa12.52□□□□□ -0.41
CCS-203ENST00000526058 DCANP1Q8TF63 244 aa12.52□□□□□ -0.41
CCS-203ENST00000526058 GLMPQ8WWB7 406 aa12.52□□□□□ -0.41
CCS-203ENST00000526058 C20orf85Q9H1P6 137 aa12.52□□□□□ -0.41
CCS-203ENST00000526058 TP53TG1Q9Y2A0 90 aa12.52□□□□□ -0.41
CCS-203ENST00000526058 PRSS46E5RG02 174 aa12.51□□□□□ -0.41
CCS-203ENST00000526058 H3BP45 60 aa12.51□□□□□ -0.41
CCS-203ENST00000526058 BUB3O43684 328 aa12.51□□□□□ -0.41
CCS-203ENST00000526058 POLR2GP62487 172 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCS-203ENST00000526058 RPP30P78346 268 aaKnown RBP12.51□□□□□ -0.41
CCS-203ENST00000526058 SPANXN5Q5MJ07 72 aa12.51□□□□□ -0.41
CCS-203ENST00000526058 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
CCS-203ENST00000526058 RNF183Q96D59 192 aa12.51□□□□□ -0.41
CCS-203ENST00000526058 RNF125Q96EQ8 232 aa12.51□□□□□ -0.41
CCS-203ENST00000526058 PBDC1Q9BVG4 233 aa12.51□□□□□ -0.41
CCS-203ENST00000526058 CSTL1Q9H114 145 aa12.51□□□□□ -0.41
CCS-203ENST00000526058 IGKV1OR2-108A0A075B7D4 117 aa12.5□□□□□ -0.41
CCS-203ENST00000526058 HELTA6NFD8 242 aa12.5□□□□□ -0.41
CCS-203ENST00000526058 IFNA21P01568 189 aa12.5□□□□□ -0.41
CCS-203ENST00000526058 CNPY1Q3B7I2 92 aa12.5□□□□□ -0.41
CCS-203ENST00000526058 RYR2Q92736 4967 aa12.5□□□□□ -0.41
CCS-203ENST00000526058 TRAV6A0A075B6T7 132 aa12.49□□□□□ -0.41
CCS-203ENST00000526058 TCRBP04435 133 aa12.49□□□□□ -0.41
CCS-203ENST00000526058 ZNF688P0C7X2 276 aa12.49□□□□□ -0.41
CCS-203ENST00000526058 NKX2-1P43699 371 aaPredicted RBP12.49□□□□□ -0.41
CCS-203ENST00000526058 EIF2B2P49770 351 aaKnown RBP12.49□□□□□ -0.41
CCS-203ENST00000526058 OR2F1Q13607 317 aa12.49□□□□□ -0.41
CCS-203ENST00000526058 THAP8Q8NA92 274 aa12.49□□□□□ -0.41
CCS-203ENST00000526058 MITD1Q8WV92 249 aa12.49□□□□□ -0.41
CCS-203ENST00000526058 TRGV9Q99603 122 aa12.49□□□□□ -0.41
CCS-203ENST00000526058 CCDC32Q9BV29 185 aa12.49□□□□□ -0.41
CCS-203ENST00000526058 STRAPQ9Y3F4 350 aaKnown RBP12.49□□□□□ -0.41
CCS-203ENST00000526058 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
CCS-203ENST00000526058 A6NHS1 94 aa12.48□□□□□ -0.41
CCS-203ENST00000526058 SSSCA1O60232 199 aa12.48□□□□□ -0.41
CCS-203ENST00000526058 AP2S1P53680 142 aaPredicted RBP12.48□□□□□ -0.41
CCS-203ENST00000526058 LYZP61626 148 aa12.48□□□□□ -0.41
CCS-203ENST00000526058 EWSR1Q01844 656 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCS-203ENST00000526058 IAH1Q2TAA2 248 aaPredicted RBP12.48□□□□□ -0.41
CCS-203ENST00000526058 IL17DQ8TAD2 202 aa12.48□□□□□ -0.41
CCS-203ENST00000526058 PSENENQ9NZ42 101 aa12.48□□□□□ -0.41
CCS-203ENST00000526058 KNCNA6PVL3 124 aa12.47□□□□□ -0.41
CCS-203ENST00000526058 SNRPGP15A8MWD9 76 aa12.47□□□□□ -0.41
CCS-203ENST00000526058 SCGB1D2O95969 90 aa12.47□□□□□ -0.41
CCS-203ENST00000526058 PAX9P55771 341 aa12.47□□□□□ -0.41
CCS-203ENST00000526058 SIGLEC15Q6ZMC9 328 aa12.47□□□□□ -0.41
CCS-203ENST00000526058 LINC00299Q6ZSB3 139 aa12.47□□□□□ -0.41
CCS-203ENST00000526058 NUDT15Q9NV35 164 aa12.47□□□□□ -0.41
CCS-203ENST00000526058 GSKIPQ9P0R6 139 aa12.47□□□□□ -0.41
CCS-203ENST00000526058 DNAH1Q9P2D7 4330 aa12.47□□□□□ -0.41
CCS-203ENST00000526058 CCSO14618 274 aa12.46□□□□□ -0.41
CCS-203ENST00000526058 FABP1P07148 127 aa12.46□□□□□ -0.41
CCS-203ENST00000526058 OR8G2PQ6IF36 304 aa12.46□□□□□ -0.41
CCS-203ENST00000526058 TMEM182Q6ZP80 229 aaPredicted RBP12.46□□□□□ -0.41
CCS-203ENST00000526058 ACOT7LQ6ZUV0 252 aa12.46□□□□□ -0.41
CCS-203ENST00000526058 STHQ8IWL8 128 aa12.46□□□□□ -0.41
CCS-203ENST00000526058 ZBTB8BQ8NAP8 495 aaPredicted RBP12.46□□□□□ -0.41
CCS-203ENST00000526058 SMIM8Q96KF7 97 aa12.46□□□□□ -0.41
CCS-203ENST00000526058 SEC22CQ9BRL7 303 aa12.46□□□□□ -0.41
CCS-203ENST00000526058 NRN1Q9NPD7 142 aa12.46□□□□□ -0.41
CCS-203ENST00000526058 PMS2P5A8MQ11 134 aa12.45□□□□□ -0.42
CCS-203ENST00000526058 CCNKO75909 580 aa12.45□□□□□ -0.42
CCS-203ENST00000526058 CA1P00915 261 aaPredicted RBP12.45□□□□□ -0.42
CCS-203ENST00000526058 GATA2P23769 480 aaPredicted RBP12.45□□□□□ -0.42
CCS-203ENST00000526058 PSMG4Q5JS54 123 aa12.45□□□□□ -0.42
CCS-203ENST00000526058 S100ZQ8WXG8 99 aa12.45□□□□□ -0.42
CCS-203ENST00000526058 TBC1D24Q9ULP9 559 aa12.45□□□□□ -0.42
CCS-203ENST00000526058 H2AFB2P0C5Z0 115 aa12.44□□□□□ -0.42
CCS-203ENST00000526058 AKR1C1Q04828 323 aa12.44□□□□□ -0.42
CCS-203ENST00000526058 ACTL10Q5JWF8 245 aa12.44□□□□□ -0.42
CCS-203ENST00000526058 GSG1LQ6UXU4 331 aa12.44□□□□□ -0.42
CCS-203ENST00000526058 TRPT1Q86TN4 253 aaKnown RBP12.44□□□□□ -0.42
CCS-203ENST00000526058 ZNF431Q8TF32 576 aaPredicted RBP12.44□□□□□ -0.42
CCS-203ENST00000526058 GATAD1Q8WUU5 269 aa12.44□□□□□ -0.42
CCS-203ENST00000526058 RARRES2Q99969 163 aa12.44□□□□□ -0.42
CCS-203ENST00000526058 RCL1Q9Y2P8 373 aaKnown RBP12.44□□□□□ -0.42
CCS-203ENST00000526058 LCE6AA0A183 80 aa12.43□□□□□ -0.42
CCS-203ENST00000526058 FAM240BA0A1B0GVZ2 78 aa12.43□□□□□ -0.42
CCS-203ENST00000526058 SMCO3A2RU48 225 aa12.43□□□□□ -0.42
CCS-203ENST00000526058 MBPP02686 304 aaPredicted RBP12.43□□□□□ -0.42
CCS-203ENST00000526058 GIG44P09565 113 aaPredicted RBP12.43□□□□□ -0.42
CCS-203ENST00000526058 METTL15P1P0C7V9 234 aa12.43□□□□□ -0.42
CCS-203ENST00000526058 NUP62P37198 522 aaPredicted RBP12.43□□□□□ -0.42
CCS-203ENST00000526058 TMEM14EPQ6UXP3 125 aa12.43□□□□□ -0.42
CCS-203ENST00000526058 PPP1R14BQ96C90 147 aa12.43□□□□□ -0.42
CCS-203ENST00000526058 RAB40CQ96S21 281 aa12.43□□□□□ -0.42
CCS-203ENST00000526058 WDR12Q9GZL7 423 aaKnown RBP12.43□□□□□ -0.42
CCS-203ENST00000526058 PFDN2Q9UHV9 154 aa12.43□□□□□ -0.42
CCS-203ENST00000526058 FAM25EA8MYX2 175 aa12.42□□□□□ -0.42
CCS-203ENST00000526058 RRAS2P62070 204 aaPredicted RBP12.42□□□□□ -0.42
CCS-203ENST00000526058 SNRPD3P62318 126 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms