RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 THADAQ6YHU6 1953 aa8.63□□□□□ -1.03
CTSC-203ENST00000524463 SRSF1Q07955 248 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTSC-203ENST00000524463 CHD5Q8TDI0 1954 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 PSG1P11464 419 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 TEX38Q6PEX7 206 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 FLVCR1-AS1Q8TAF5 88 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 C18orf12Q96KH6 178 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 COL4A6Q14031 1691 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 LOC102723996A0A087X1L8 192 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 TRBV9A0A0B4J1U6 114 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 F8VVB4 439 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 F8VWA3 439 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 DUTP33316 252 aaKnown RBP8.62□□□□□ -1.03
CTSC-203ENST00000524463 FNDC4Q9H6D8 234 aaPredicted RBP8.62□□□□□ -1.03
CTSC-203ENST00000524463 TRAV8-2A0A0B4J237 113 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 UCP1P25874 307 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 TIMP3P35625 211 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 DEFB131AP59861 70 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 PSMG3Q9BT73 122 aaPredicted RBP8.62□□□□□ -1.03
CTSC-203ENST00000524463 KLK9Q9UKQ9 250 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 MRPS18CQ9Y3D5 142 aaKnown RBP8.62□□□□□ -1.03
CTSC-203ENST00000524463 ANKRD36A6QL64 1941 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 OVOL3O00110 214 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 SMDT1Q9H4I9 107 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 LRRC37AA6NMS7 1700 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 A0A1B0GV90 55 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 PLSCR4Q9NRQ2 329 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 ZNF581Q9P0T4 197 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 LAMTOR3Q9UHA4 124 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
CTSC-203ENST00000524463 SSBP2P81877 361 aaPredicted RBP8.61□□□□□ -1.03
CTSC-203ENST00000524463 SRSF3P84103 164 aaKnown RBP8.61□□□□□ -1.03
CTSC-203ENST00000524463 H3BUT2 72 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 DKK1O94907 266 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 CD200R1LQ6Q8B3 271 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 TMEM144Q7Z5S9 345 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 CACNG8Q8WXS5 425 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 PSPNO60542 156 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 ANXA2RQ3ZCQ2 193 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 RFNGQ9Y644 331 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 E7EQL1 145 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 SMKR1H3BMG3 65 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 LHBP01229 141 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 SPSB3Q6PJ21 355 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 IGFBPL1Q8WX77 278 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
CTSC-203ENST00000524463 GGACTQ9BVM4 153 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 RNF114Q9Y508 228 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 SCN5AQ14524 2016 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 IGKV1-12A0A0C4DH73 117 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 ERVH48-1M5A8F1 160 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 OVOL1O14753 267 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 IGKV1D-12P01611 117 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 EFNB3Q15768 340 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 C14orf178Q8N769 122 aaPredicted RBP8.61□□□□□ -1.03
CTSC-203ENST00000524463 GAFA1Q96PS6 74 aa8.61□□□□□ -1.03
CTSC-203ENST00000524463 PTPRFP10586 1907 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 BUB1B-PAK6H3BSN5 160 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 IL18BPO95998 194 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 DDTP30046 118 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 PRCDQ00LT1 54 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 CLPSL2Q6UWE3 100 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 IGLV3-12A0A075B6K2 115 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 SERF1AO75920 110 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 RBBP6Q7Z6E9 1792 aaKnown RBP8.6□□□□□ -1.03
CTSC-203ENST00000524463 MLANAQ16655 118 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 RHPN1-AS1Q9BWJ2 59 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 NRXN2Q9P2S2 1712 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 IGKV1-27A0A075B6S5 117 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 IGLV2-23P01705 113 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 SRP19P09132 144 aaKnown RBP8.6□□□□□ -1.03
CTSC-203ENST00000524463 TMEM86BQ8N661 226 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 PAX9P55771 341 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 LAIR2Q6ISS4 152 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 SPCS1Q9Y6A9 102 aa8.6□□□□□ -1.03
CTSC-203ENST00000524463 RALGAPA1Q6GYQ0 2036 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 PATJQ8NI35 1801 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 GAGE12JA6NER3 117 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 GAGE1Q13065 139 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 GAGE4Q13068 117 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 GAGE5Q13069 117 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 GAGE13Q4V321 117 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 LINC00114Q6XXX2 140 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 WFDC1Q9HC57 220 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 DMRT1Q9Y5R6 373 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 PSME4Q14997 1843 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 DAD1P61803 113 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 RPL23P62829 140 aaKnown RBP8.59□□□□□ -1.03
CTSC-203ENST00000524463 RNF144BQ7Z419 303 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 BRCA1P38398 1863 aaKnown RBP8.59□□□□□ -1.03
CTSC-203ENST00000524463 HIST1H4AP62805 103 aaKnown RBP8.59□□□□□ -1.03
CTSC-203ENST00000524463 RPL36AP83881 106 aaKnown RBP8.59□□□□□ -1.03
CTSC-203ENST00000524463 TET1Q8NFU7 2136 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 RPL36ALQ969Q0 106 aaKnown RBP8.59□□□□□ -1.03
CTSC-203ENST00000524463 RNF166Q96A37 237 aaPredicted RBP8.59□□□□□ -1.03
CTSC-203ENST00000524463 SLC25A2Q9BXI2 301 aa8.59□□□□□ -1.03
CTSC-203ENST00000524463 IGHV3-38A0A0C4DH36 116 aa8.58□□□□□ -1.04
CTSC-203ENST00000524463 HOXD3P31249 432 aaPredicted RBP8.58□□□□□ -1.04
CTSC-203ENST00000524463 CR1LQ2VPA4 569 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms