RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 FAM19A4Q96LR4 140 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 SRXN1Q9BYN0 137 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 LIME1Q9H400 295 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 ZFC3H1O60293 1989 aaKnown RBP5.21□□□□□ -1.58
SDC2-208ENST00000523877 LAMB2P55268 1798 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 TRGV5A0A0B4J1U4 118 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 IGHV1-58A0A0C4DH39 117 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 F5H697 171 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 PRYO14603 147 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 SS18L1O75177 396 aaPredicted RBP5.2□□□□□ -1.58
SDC2-208ENST00000523877 SCRG1O75711 98 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 CD55P08174 381 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 LIM2P55344 173 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 SNRPFP62306 86 aaKnown RBP5.2□□□□□ -1.58
SDC2-208ENST00000523877 SNRPGP62308 76 aaKnown RBP5.2□□□□□ -1.58
SDC2-208ENST00000523877 CENPWQ5EE01 88 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 FRG2Q64ET8 278 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 PVRIGQ6DKI7 326 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 CYP2G1PQ6ZSU1 146 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 ATP5L2Q7Z4Y8 100 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 MRGPREQ86SM8 312 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 WFDC11Q8NEX6 87 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 IL1F10Q8WWZ1 152 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 MGST2Q99735 147 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 PRSS27Q9BQR3 290 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 DEFB127Q9H1M4 99 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 CKLFQ9UBR5 152 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 MYLKQ15746 1914 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 PATJQ8NI35 1801 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 PLXNA4Q9HCM2 1894 aa5.2□□□□□ -1.58
SDC2-208ENST00000523877 MKI67P46013 3256 aaKnown RBP5.19□□□□□ -1.58
SDC2-208ENST00000523877 TSC2P49815 1807 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 SCN10AQ9Y5Y9 1956 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 WI2-2373I1.2A0A1W2PRP0 233 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 LGALS9O00182 355 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 NUPR1O60356 82 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 OR1I1O60431 355 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 CST7O76096 145 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 IGKCP01834 107 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 TCRAP04437 139 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 HOXB7P09629 217 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 MDKP21741 143 aaPredicted RBP5.19□□□□□ -1.58
SDC2-208ENST00000523877 PLA2G5P39877 138 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 INSL3P51460 131 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 SUMO2P61956 95 aaKnown RBP5.19□□□□□ -1.58
SDC2-208ENST00000523877 ICAM4Q14773 271 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 TMEM30BQ3MIR4 351 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 FAM57BQ71RH2 274 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 C3orf56Q8N813 242 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 OR52N5Q8NH56 324 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 OR8B2Q96RD0 313 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 FAM60AQ9NP50 221 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 ANAPC10Q9UM13 185 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 F11RQ9Y624 299 aaKnown RBP5.19□□□□□ -1.58
SDC2-208ENST00000523877 FANCMQ8IYD8 2048 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 DLEC1Q9Y238 1755 aa5.19□□□□□ -1.58
SDC2-208ENST00000523877 A0A0G2JK05 382 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 A0A0G2JNJ9 132 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 A0A1B0GXF2 115 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 SDCBPO00560 298 aaPredicted RBP5.18□□□□□ -1.58
SDC2-208ENST00000523877 NDUFB3O43676 98 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 CSN1S1P47710 185 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 ERCC8Q13216 396 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 TMEM187Q14656 261 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 ZNF791Q3KP31 576 aaPredicted RBP5.18□□□□□ -1.58
SDC2-208ENST00000523877 PIK3CD-AS1Q5SR53 167 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 CFAP126Q5VTH2 177 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 RPL7L1Q6DKI1 246 aaKnown RBP5.18□□□□□ -1.58
SDC2-208ENST00000523877 CEND1Q8N111 149 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 APCDD1LQ8NCL9 501 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 ZNF564Q8TBZ8 553 aaPredicted RBP5.18□□□□□ -1.58
SDC2-208ENST00000523877 CHCHD5Q9BSY4 110 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 OCIAD1Q9NX40 245 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 Q9UFV3 132 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 KLK5Q9Y337 293 aaPredicted RBP5.18□□□□□ -1.58
SDC2-208ENST00000523877 ARL2-SNX15V9GYD0 113 aa5.18□□□□□ -1.58
SDC2-208ENST00000523877 TJP1Q07157 1748 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 TDRD15B5MCY1 1934 aaKnown RBP5.17□□□□□ -1.58
SDC2-208ENST00000523877 SCN8AQ9UQD0 1980 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 UNC80Q8N2C7 3258 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 A0A0A6YYD4 124 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 TRAV2A0A0B4J234 112 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 PRR32B1ATL7 298 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 H3BP45 60 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 UBE2L6O14933 153 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 FOXS1O43638 330 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 TRIAP1O43715 76 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 SYNGR2O43760 224 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 CD7P09564 240 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 LGALS3P17931 250 aaKnown RBP5.17□□□□□ -1.58
SDC2-208ENST00000523877 IL3RAP26951 378 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 MYCNOSP40205 109 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 WDR86Q86TI4 376 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 OR5AS1Q8N127 324 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 GVQW1Q8N7I0 195 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 OR2A5Q96R48 311 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 TM2D3Q9BRN9 247 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 FAM103A1Q9BTL3 118 aaKnown RBP5.17□□□□□ -1.58
SDC2-208ENST00000523877 CLEC7AQ9BXN2 247 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms