RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CTSDP07339 412 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-215ENST00000519474 CTSGP08311 255 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 MRPS10P82664 201 aaKnown RBP7.02□□□□□ -1.29
HDAC3-215ENST00000519474 ATP6V1FQ16864 119 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 SCGB2B2Q4G0G5 96 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 FAAP20Q6NZ36 180 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 Q6ZRM9 215 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 TCF24Q7RTU0 167 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 OR1L6Q8NGR2 347 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 OR13C8Q8NGS7 320 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 OR1P1Q8NH06 330 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 DYNLRB2Q8TF09 96 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 SMIM4Q8WVI0 70 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 TUBA4BQ9H853 241 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 ZMAT4Q9H898 229 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 C21orf62Q9NYP8 219 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 MRPL27Q9P0M9 148 aaKnown RBP7.02□□□□□ -1.29
HDAC3-215ENST00000519474 GSKIPQ9P0R6 139 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 UBQLN2Q9UHD9 624 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 A0A0G2JRQ6 117 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 RBMY1BA6NDE4 496 aaKnown RBP7.01□□□□□ -1.29
HDAC3-215ENST00000519474 RBMY1EA6NEQ0 496 aaKnown RBP7.01□□□□□ -1.29
HDAC3-215ENST00000519474 I3L2K1 104 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 CYB5BO43169 146 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 GSTZ1O43708 216 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-215ENST00000519474 CDS2O95674 445 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 RBMY1DP0C7P1 496 aaKnown RBP7.01□□□□□ -1.29
HDAC3-215ENST00000519474 C4BPBP20851 252 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 RAB5CP51148 216 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 ERHP84090 104 aaKnown RBP7.01□□□□□ -1.29
HDAC3-215ENST00000519474 PRCDQ00LT1 54 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 IFITM3Q01628 133 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 TRIQKQ629K1 86 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 ZNF57Q68EA5 555 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-215ENST00000519474 GTSCR1Q86UQ5 136 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 ZFP82Q8N141 532 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 DEFB125Q8N687 156 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 DAZAP1Q96EP5 407 aaKnown RBP7.01□□□□□ -1.29
HDAC3-215ENST00000519474 ALKBH7Q9BT30 221 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-215ENST00000519474 C5orf66Q9H5L9 145 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 TBC1D24Q9ULP9 559 aa7.01□□□□□ -1.29
HDAC3-215ENST00000519474 COL7A1Q02388 2944 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 ANKRD20A5PA0PJZ0 165 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 OR11H12B2RN74 326 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 DISC1C4P0D8 188 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 INS-IGF2F8WCM5 200 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 K7EMT4 169 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 ST8SIA3O43173 380 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 IGHV3-48P01763 117 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 AKAIN1P0CW23 69 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 FCGR2BP31994 310 aaPredicted RBP7□□□□□ -1.29
HDAC3-215ENST00000519474 MFAP4P55083 255 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 MEF2DQ14814 521 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 MLANAQ16655 118 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 SPINK9Q5DT21 86 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 DMRTA1Q5VZB9 504 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 PVRIGQ6DKI7 326 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 SPSB3Q6PJ21 355 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 TMEM61Q8N0U2 210 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 ZNF114Q8NC26 417 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 OR4C16Q8NGL9 310 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 PLEKHA3Q9HB20 300 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 SLC2A8Q9NY64 477 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 UFC1Q9Y3C8 167 aa7□□□□□ -1.29
HDAC3-215ENST00000519474 C3orf84H3BNL1 204 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 M0R143 59 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 NDUFA4O00483 81 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 MT-CO2P00403 227 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 OR5AC1P0C628 307 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 SURF2Q15527 256 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-215ENST00000519474 VAMP3Q15836 100 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 C5orf47Q569G3 176 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 Q56UQ5 140 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 BTNL8Q6UX41 500 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 TMED4Q7Z7H5 227 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 UBAC2Q8NBM4 344 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 OR51S1Q8NGJ8 323 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 MCFD2Q8NI22 146 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
HDAC3-215ENST00000519474 TMEM190Q8WZ59 177 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 GPR146Q96CH1 333 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 SRRQ9GZT4 340 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 TMEM222Q9H0R3 208 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 WFDC10AQ9H1F0 79 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
HDAC3-215ENST00000519474 BOLA1Q9Y3E2 137 aa6.99□□□□□ -1.29
HDAC3-215ENST00000519474 IGHV3OR16-8A0A075B7F1 116 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 A0A1B0GW15 77 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 CRYM-AS1A6NIL9 109 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 ZNF207O43670 478 aaKnown RBP6.98□□□□□ -1.29
HDAC3-215ENST00000519474 ATG12O94817 140 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 TMEM50AO95807 157 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 RNASE2P10153 161 aaKnown RBP6.98□□□□□ -1.29
HDAC3-215ENST00000519474 PVALBP20472 110 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-215ENST00000519474 AKR1C2P52895 323 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 SELENOTP62341 195 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 RPL19P84098 196 aaKnown RBP6.98□□□□□ -1.29
HDAC3-215ENST00000519474 DHODHQ02127 395 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 COX19Q49B96 90 aa6.98□□□□□ -1.29
HDAC3-215ENST00000519474 CST9LP1Q5W188 147 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms