RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 GOLT1AQ6ZVE7 132 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 OR52R1Q8NGF1 315 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 BTF3L4Q96K17 158 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 SELENOSQ9BQE4 189 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 KIFC1Q9BW19 673 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 CCDC90BQ9GZT6 254 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 NHP2Q9NX24 153 aaKnown RBP1.07□□□□□ -2.24
SQLE-202ENST00000518604 PRNDQ9UKY0 176 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 UFC1Q9Y3C8 167 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 HEATR5BQ9P2D3 2071 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 RTL1A6NKG5 1358 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 MYH2Q9UKX2 1941 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 DIDO1Q9BTC0 2240 aaKnown RBP1.06□□□□□ -2.24
SQLE-202ENST00000518604 hCG_1818297A0A087WSY0 165 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 LOC110117498A0A087WWA1 95 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 C2orf70A6NJV1 201 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 A8MT66 165 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 HYPMO75409 117 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 ATG12O94817 140 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 C8GP07360 202 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 S100A4P26447 101 aaKnown RBP1.06□□□□□ -2.24
SQLE-202ENST00000518604 ATP5G3P48201 142 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 YPEL3P61236 119 aaPredicted RBP1.06□□□□□ -2.24
SQLE-202ENST00000518604 RHOGP84095 191 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 SNCBQ16143 134 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 FAM19A2Q8N3H0 131 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 GPR146Q96CH1 333 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 PCBD2Q9H0N5 130 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 RNF122Q9H9V4 155 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 MRPL40Q9NQ50 206 aaKnown RBP1.06□□□□□ -2.24
SQLE-202ENST00000518604 MED29Q9NX70 200 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 SLC35A3Q9Y2D2 325 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 UTP11Q9Y3A2 253 aaKnown RBP1.06□□□□□ -2.24
SQLE-202ENST00000518604 C22orf24Q9Y442 160 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 CACNA1BQ00975 2339 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 HEATR5AQ86XA9 2040 aa1.06□□□□□ -2.24
SQLE-202ENST00000518604 MYOFQ9NZM1 2061 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 IGKV1-9A0A0C4DH69 117 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 LOC105371267A0A1B0GV96 52 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 CLDN25C9JDP6 229 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 NBEAP1P0C6P0 100 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 RAB4BP61018 213 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 Q6Q795 121 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 AKAP14Q86UN6 197 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 TAC4Q86UU9 113 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 SLC25A40Q8TBP6 338 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 ADAT3Q96EY9 351 aaPredicted RBP1.05□□□□□ -2.24
SQLE-202ENST00000518604 LINC00526Q96FQ7 95 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 C2orf50Q96LR7 162 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 DDA1Q9BW61 102 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 TMEM133Q9H2Q1 129 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 CENPHQ9H3R5 247 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 OSTCQ9NRP0 149 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 KLK9Q9UKQ9 250 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 PYCARDQ9ULZ3 195 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 HS3ST2Q9Y278 367 aa1.05□□□□□ -2.24
SQLE-202ENST00000518604 TRBV19A0A075B6N1 114 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 TRAV1-1A0A0B4J248 108 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 GPR31O00270 319 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 HMGB3O15347 200 aaKnown RBP1.04□□□□□ -2.24
SQLE-202ENST00000518604 PIAS1O75925 651 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 UBL3O95164 117 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 CSN2P05814 226 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 SMIM17P0DL12 118 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 ERP29P30040 261 aaKnown RBP1.04□□□□□ -2.24
SQLE-202ENST00000518604 SERPINB1P30740 379 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 RHOBP62745 196 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 GNG5P63218 68 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 LINC01554Q52M75 96 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 TMEM78Q5T7P6 136 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 TRIQKQ629K1 86 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 C3orf33Q6P1S2 294 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 LCA10Q71F78 164 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 GRINAQ7Z429 371 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 OR10K1Q8NGX5 313 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 GNPDA2Q8TDQ7 276 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 SH3BGRL3Q9H299 93 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 ACER3Q9NUN7 267 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 EPDR1Q9UM22 224 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 NDUFAF1Q9Y375 327 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 V9GYQ6 96 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 MYH7BA7E2Y1 1941 aa1.04□□□□□ -2.24
SQLE-202ENST00000518604 DLG5Q8TDM6 1919 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 ARFGEF3Q5TH69 2177 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 A0A1B0GV72 72 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 C7orf71A4D174 169 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 J3QRK9 145 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 PROSCO94903 275 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 PPIBP23284 216 aaKnown RBP1.03□□□□□ -2.24
SQLE-202ENST00000518604 CASP1P29466 404 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 RNASE4P34096 147 aaKnown RBP1.03□□□□□ -2.24
SQLE-202ENST00000518604 GLRXP35754 106 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 SSR2P43308 183 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 PIGPP57054 158 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 NCALDP61601 193 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 TFAMQ00059 246 aaKnown RBP1.03□□□□□ -2.24
SQLE-202ENST00000518604 OR13C6PQ8NH95 151 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 WFDC5Q8TCV5 224 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 ZNF418Q8TF45 676 aaPredicted RBP1.03□□□□□ -2.24
SQLE-202ENST00000518604 SLAMF6Q96DU3 332 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms