RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 RIMBP3CA6NJZ7 1639 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 RIMBP3BA6NNM3 1639 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 RIMBP3Q9UFD9 1639 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 OTOGLQ3ZCN5 2332 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 MIA2Q96PC5 1412 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 ARHGEF28Q8N1W1 1705 aaKnown RBP1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 HEATR5AQ86XA9 2040 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 DOCK3Q8IZD9 2030 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 IGKV3-7A0A075B6H7 116 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 TRAV14DV4A0A0A6YYC5 116 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 E5RI56 91 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 HMGB3O15347 200 aaKnown RBP1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 HCRTO43612 131 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 NDUFC2O95298 119 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 RAB4BP61018 213 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 ESRGQ1W209 222 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 BRMS1LQ5PSV4 323 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 BCL2L15Q5TBC7 163 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 CDC26Q8NHZ8 85 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 BOLA2Q9H3K6 86 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 ECM29Q5VYK3 1845 aa1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 ZNF106Q9H2Y7 1883 aaKnown RBP1.07□□□□□ -2.24
RNU6-390P-201ENST00000516259 LOC110117498A0A087WWA1 95 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 A8MWV9 139 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 M0R2N4 97 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 HYPMO75409 117 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 SSR2P43308 183 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 SERPINB9P50453 376 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 NCALDP61601 193 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 CDK5R1Q15078 307 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 AKR1C8PQ5T2L2 129 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 Q6ZSA8 131 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 C3orf56Q8N813 242 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 NUP35Q8NFH5 326 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 C10orf105Q8TEF2 133 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 SFT2D1Q8WV19 159 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 GINS3Q9BRX5 216 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 PRADC1Q9BSG0 188 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 REG4Q9BYZ8 158 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 BCL2L10Q9HD36 194 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 MYH11P35749 1972 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 RP1L1Q8IWN7 2480 aaPredicted RBP1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 UHRF1BP1Q6BDS2 1440 aa1.06□□□□□ -2.24
RNU6-390P-201ENST00000516259 SDK1Q7Z5N4 2213 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 A0A087WX48 190 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 TRAV1-1A0A0B4J248 108 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 C1orf196B1AJZ1 125 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 CLDN25C9JDP6 229 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 TMEM238C9JI98 176 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 G3V2T6 193 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 H7C1C5 153 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 M0R378 163 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 TAX1BP3O14907 124 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 PHBP35232 272 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 LCN6P62502 163 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 RHOBP62745 196 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 UBE2BP63146 152 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 DYNLT1P63172 113 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 MYL5Q02045 173 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 S100A7AQ86SG5 101 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 SLC30A7Q8NEW0 376 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 MALSU1Q96EH3 234 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 ACER3Q9NUN7 267 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 SNURFQ9Y675 71 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 KDM6AO15550 1401 aaPredicted RBP1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 TNS3Q68CZ2 1445 aa1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 YTHDC2Q9H6S0 1430 aaKnown RBP1.05□□□□□ -2.24
RNU6-390P-201ENST00000516259 ZCCHC11Q5TAX3 1644 aaKnown RBP1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 LAMB2P55268 1798 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 TRAV5A0A0B4J249 113 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 DUXBA0A1W2PPF3 345 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 PIAS1O75925 651 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 DHFRP00374 187 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 C1orf137Q5JT78 98 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 LINC00301Q8NCQ3 95 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 OR13C6PQ8NH95 151 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 ZNF418Q8TF45 676 aaPredicted RBP1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 LINC00526Q96FQ7 95 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 LYSMD1Q96S90 227 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 RTL8AQ9BWD3 113 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 RASL12Q9NYN1 266 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 SSR3Q9UNL2 185 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 UTP11Q9Y3A2 253 aaKnown RBP1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 DENND4CQ5VZ89 1909 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 PLXND1Q9Y4D7 1925 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 TRPM1Q7Z4N2 1603 aa1.04□□□□□ -2.24
RNU6-390P-201ENST00000516259 NDUFB3O43676 98 aa1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 APOA2P02652 100 aa1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 MGST1P10620 155 aaKnown RBP1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 GNG3P63215 75 aa1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 PDZD9Q8IXQ8 264 aa1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 STAG3L4Q8TBR4 150 aa1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 GPER1Q99527 375 aa1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 MRPL57Q9BQC6 102 aaKnown RBP1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 BIN3Q9NQY0 253 aa1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 NISCHQ9Y2I1 1504 aa1.03□□□□□ -2.24
RNU6-390P-201ENST00000516259 FREM1Q5H8C1 2179 aa1.03□□□□□ -2.25
RNU6-390P-201ENST00000516259 BAZ2BQ9UIF8 2168 aaKnown RBP1.03□□□□□ -2.25
RNU6-390P-201ENST00000516259 A0A087WSZ3 146 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms