RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 ARHGAP21Q5T5U3 1957 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 KIAA1549Q9HCM3 1950 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 SPINK4O60575 86 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 RND3P61587 244 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 MEF2BQ02080 365 aaPredicted RBP10.1□□□□□ -0.79
LIN54-210ENST00000510877 CLEC19AQ6UXS0 136 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 SAA2-SAA4A0A096LPE2 208 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 SAA2P0DJI9 122 aaPredicted RBP10.1□□□□□ -0.79
LIN54-210ENST00000510877 SPINK9Q5DT21 86 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 VAX1Q5SQQ9 334 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 C1orf100Q5SVJ3 147 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 FGF16O43320 207 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 OR9G9P0C7N8 305 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 TMEM42Q69YG0 159 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 SFRP2Q96HF1 295 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 PSMG4Q5JS54 123 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 Q6YL49 198 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 SPATA3Q8NHX4 192 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 OR4C46A6NHA9 309 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 F8VVB4 439 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 F8VWA3 439 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 CCL24O00175 119 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 LYZP61626 148 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 SRSF12Q8WXF0 261 aaKnown RBP10.09□□□□□ -0.79
LIN54-210ENST00000510877 FLNAP21333 2647 aaKnown RBP10.09□□□□□ -0.79
LIN54-210ENST00000510877 NUDT3O95989 172 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 GPR183P32249 361 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 ZNF506Q5JVG8 444 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 GVQW1Q8N7I0 195 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 ZNF256Q9Y2P7 627 aaPredicted RBP10.09□□□□□ -0.79
LIN54-210ENST00000510877 UFC1Q9Y3C8 167 aa10.09□□□□□ -0.79
LIN54-210ENST00000510877 SYNGR2O43760 224 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 KBTBD11O94819 623 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST3H2BBQ8N257 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 ORAOV1Q8WV07 137 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 STAB1Q9NY15 2570 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 CHD3Q12873 2000 aaKnown RBP10.08□□□□□ -0.8
LIN54-210ENST00000510877 REG1AP05451 166 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 C1orf194Q5T5A4 169 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 Q8NFD4 153 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 OR5A1Q8NGJ0 315 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 MBD3L1Q8WWY6 194 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 LINC01619G3V211 115 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HLA-DRB1P01911 266 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 NPPCP23582 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 CAMPP49913 170 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 CX3CL1P78423 397 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 PYY3Q5JQD4 70 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 ZNF497Q6ZNH5 498 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 WDR86Q86TI4 376 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 MEGF9Q9H1U4 602 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 TMEM250H0YL14 139 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BKO60814 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 PAGE4O60829 102 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 SNCGO76070 127 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BJP06899 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BOP23527 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BBP33778 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BDP58876 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BCP62807 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 GAGE1Q13065 139 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST2H2BEQ16778 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.08□□□□□ -0.8
LIN54-210ENST00000510877 LCN12Q6JVE5 192 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 TMEM136Q6ZRR5 245 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BHQ93079 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 RAX2Q96IS3 184 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BNQ99877 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BMQ99879 126 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 RNF5Q99942 180 aa10.08□□□□□ -0.8
LIN54-210ENST00000510877 IGKV1-12A0A0C4DH73 117 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 IGKV1D-12P01611 117 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 IGHV3-23P01764 117 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 PSMB2P49721 201 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 BLCAPP62952 87 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 RNF144BQ7Z419 303 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 LSM10Q969L4 123 aaKnown RBP10.07□□□□□ -0.8
LIN54-210ENST00000510877 HIST1H2BLQ99880 126 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 CITED2Q99967 270 aaPredicted RBP10.07□□□□□ -0.8
LIN54-210ENST00000510877 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 MRPL18Q9H0U6 180 aaKnown RBP10.07□□□□□ -0.8
LIN54-210ENST00000510877 TRBV5-7A0A0A0MS05 114 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 CMC4P56277 68 aaPredicted RBP10.07□□□□□ -0.8
LIN54-210ENST00000510877 SLC25A48Q6ZT89 311 aaKnown RBP10.07□□□□□ -0.8
LIN54-210ENST00000510877 S4R3C0 116 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 UBE2V1Q13404 147 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 TMEM95Q3KNT9 176 aa10.07□□□□□ -0.8
LIN54-210ENST00000510877 PSMG3Q9BT73 122 aaPredicted RBP10.07□□□□□ -0.8
LIN54-210ENST00000510877 SNRPD3P62318 126 aaKnown RBP10.06□□□□□ -0.8
LIN54-210ENST00000510877 C8orf86Q6ZUL3 223 aa10.06□□□□□ -0.8
LIN54-210ENST00000510877 HOGA1Q86XE5 327 aa10.06□□□□□ -0.8
LIN54-210ENST00000510877 PRSS1P07477 247 aa10.06□□□□□ -0.8
LIN54-210ENST00000510877 SNRPCP09234 159 aaKnown RBP10.06□□□□□ -0.8
LIN54-210ENST00000510877 NPY1RP25929 384 aa10.06□□□□□ -0.8
LIN54-210ENST00000510877 CFPP27918 469 aa10.06□□□□□ -0.8
LIN54-210ENST00000510877 RSPO1Q2MKA7 263 aaPredicted RBP10.06□□□□□ -0.8
LIN54-210ENST00000510877 TMEM177Q53S58 311 aa10.06□□□□□ -0.8
LIN54-210ENST00000510877 FHL1Q13642 323 aa10.06□□□□□ -0.8
LIN54-210ENST00000510877 OR10W1Q8NGF6 305 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms