RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 ABCA1O95477 2261 aa7.08□□□□□ -1.28
NR1I3-216ENST00000502848 NAV3Q8IVL0 2385 aa7.08□□□□□ -1.28
NR1I3-216ENST00000502848 AKAP9Q99996 3911 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 WI2-2373I1.2A0A1W2PRP0 233 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 RBFOX3A6NFN3 312 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 DNAJC9-AS1A6NH13 148 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 LINC01548A6NM66 108 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 HYPMO75409 117 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 RNASE1P07998 156 aaKnown RBP7.07□□□□□ -1.28
NR1I3-216ENST00000502848 C8orf88P0DMB2 117 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 BCL2P10415 239 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 PSG1P11464 419 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 CD99P14209 185 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 PSMB8P28062 276 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 HILS1P60008 231 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 ZNF90Q03938 601 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 GUK1Q16774 197 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 ZNF600Q6ZNG1 722 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 MYOZ3Q8TDC0 251 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 CITED4Q96RK1 184 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 SCRT1Q9BWW7 348 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 NKX6-2Q9C056 277 aaPredicted RBP7.07□□□□□ -1.28
NR1I3-216ENST00000502848 MRPL27Q9P0M9 148 aaKnown RBP7.07□□□□□ -1.28
NR1I3-216ENST00000502848 VAX2Q9UIW0 290 aa7.07□□□□□ -1.28
NR1I3-216ENST00000502848 LOC102723971A0A1B0GUV8 181 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 TMEM250H0YL14 139 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 I3L521 148 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 BMPR1BO00238 502 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 LY6G6DO95868 133 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 TRGV3P03979 118 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 CTSGP08311 255 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 Q56UQ5 140 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 C10orf91Q5T1B1 145 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 FAM78BQ5VT40 261 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 ZNF343Q6P1L6 599 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 TEX38Q6PEX7 206 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 LCN15Q6UWW0 184 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 SSX7Q7RTT5 188 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 TMEM37Q8WXS4 190 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 RNF125Q96EQ8 232 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 SEC11CQ9BY50 192 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 EIF5A2Q9GZV4 153 aaKnown RBP7.06□□□□□ -1.28
NR1I3-216ENST00000502848 SEPSECSQ9HD40 501 aaKnown RBP7.06□□□□□ -1.28
NR1I3-216ENST00000502848 ZNF355PQ9NSJ1 428 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 TMEM14CQ9P0S9 112 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 HIGD1AQ9Y241 93 aa7.06□□□□□ -1.28
NR1I3-216ENST00000502848 FLNAP21333 2647 aaKnown RBP7.06□□□□□ -1.28
NR1I3-216ENST00000502848 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.05□□□□□ -1.28
NR1I3-216ENST00000502848 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 SH2D7A6NKC9 451 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-216ENST00000502848 TGOLN2O43493 480 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 PDE6DO43924 150 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 ARL14EPLP0DKL9 152 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 GCHFRP30047 84 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 TPPP2P59282 170 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 MEF2BQ02080 365 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-216ENST00000502848 TIGITQ495A1 244 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 GCSAMLQ5JQS6 135 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 TOR2AQ5JU69 321 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 ZNF491Q8N8L2 437 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 CCDC140Q96MF4 163 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 GPR82Q96P67 336 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 SLC35B3Q9H1N7 401 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 C16orf95Q9H693 158 aa7.05□□□□□ -1.28
NR1I3-216ENST00000502848 CARHSP1Q9Y2V2 147 aaKnown RBP7.05□□□□□ -1.28
NR1I3-216ENST00000502848 IGHV3-21A0A0B4J1V1 117 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 A0A1W2PRE2 83 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 H3BRN7 92 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 NDUFA7O95182 113 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 IGHV3-48P01763 117 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 ADMP35318 185 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 MEOX2P50222 304 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 CCL20P78556 96 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 C1orf194Q5T5A4 169 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 PATE2Q6UY27 113 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 IL17RELQ6ZVW7 336 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 LINC00305Q7Z4B0 112 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 FAM167A-AS1Q96KT0 104 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 UBE2E2Q96LR5 201 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 NOL4LQ96MY1 436 aaPredicted RBP7.04□□□□□ -1.28
NR1I3-216ENST00000502848 SHANK2-AS3Q9BTD1 123 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 TREM1Q9NP99 234 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 GNG13Q9P2W3 67 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 PLXNB1O43157 2135 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 CSPG4Q6UVK1 2322 aa7.04□□□□□ -1.28
NR1I3-216ENST00000502848 CSMD1Q96PZ7 3565 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 OR2T8A6NH00 312 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 F6UZH7 168 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 NDUFA4O00483 81 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 OR7C2O60412 319 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 IL4P05112 153 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 CLEC3BP05452 202 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 CRYBA1P05813 215 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 PF4V1P10720 104 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 ORM2P19652 201 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 GATA2P23769 480 aaPredicted RBP7.03□□□□□ -1.28
NR1I3-216ENST00000502848 GPR183P32249 361 aa7.03□□□□□ -1.28
NR1I3-216ENST00000502848 FGF8P55075 233 aaPredicted RBP7.03□□□□□ -1.28
NR1I3-216ENST00000502848 LYZP61626 148 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms