RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 UCK1Q9HA47 277 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 UQCC1Q9NVA1 299 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 TAS2R7Q9NYW3 318 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 NOSIPQ9Y314 301 aaKnown RBP0.15□□□□□ -2.39
SMC4-227ENST00000497984 EXPH5Q8NEV8 1989 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 IGHV1-58A0A0C4DH39 117 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 TLCD2A6NGC4 264 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 SMIM9A6NGZ8 99 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 DHFRP00374 187 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 KRTAP2-3P0C7H8 128 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 RNASE4P34096 147 aaKnown RBP0.14□□□□□ -2.39
SMC4-227ENST00000497984 RHOBP62745 196 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 KRTAP26-1Q6PEX3 210 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 Q6Q795 121 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 TRAPPC5Q8IUR0 188 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 OR6V1Q8N148 313 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 BORCS7Q96B45 105 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 CMSS1Q9BQ75 279 aaKnown RBP0.14□□□□□ -2.39
SMC4-227ENST00000497984 PRADC1Q9BSG0 188 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 KRTAP2-4Q9BYR9 128 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 KRTAP2-1Q9BYU5 128 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 RNF122Q9H9V4 155 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 IDI2-AS1Q9NZ38 188 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 TMEM14CQ9P0S9 112 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 PRELID3BQ9Y3B1 194 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 ADCY9O60503 1353 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 MED12LQ86YW9 2145 aa0.14□□□□□ -2.39
SMC4-227ENST00000497984 A0A0D9SG42 100 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 TCRBV4S1A1TA0A5B7 111 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 OR2T8A6NH00 312 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 CYB5BO43169 146 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 NUPR1O60356 82 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 C8GP07360 202 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 RPS17P08708 135 aaKnown RBP0.13□□□□□ -2.39
SMC4-227ENST00000497984 PPIBP23284 216 aaKnown RBP0.13□□□□□ -2.39
SMC4-227ENST00000497984 HOXA6P31267 233 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 ANP32AP39687 249 aaKnown RBP0.13□□□□□ -2.39
SMC4-227ENST00000497984 OMPP47874 163 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 LSM6P62312 80 aaKnown RBP0.13□□□□□ -2.39
SMC4-227ENST00000497984 AESQ08117 197 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 ST6GALNAC3Q8NDV1 305 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 SLC30A7Q8NEW0 376 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 OR2T35Q8NGX2 323 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 TMEM254Q8TBM7 123 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 STAG3L4Q8TBR4 150 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.13□□□□□ -2.39
SMC4-227ENST00000497984 FBXO5Q9UKT4 447 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 KMT2CQ8NEZ4 4911 aaKnown RBP0.13□□□□□ -2.39
SMC4-227ENST00000497984 ZFYVE9O95405 1425 aa0.13□□□□□ -2.39
SMC4-227ENST00000497984 B4DSR2 109 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 TIMM17BO60830 172 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 NIPSNAP2O75323 286 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 TCRBP04435 133 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 AP3S2P59780 193 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 ROMO1P60602 79 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 CIRBPQ14011 172 aaKnown RBP0.12□□□□□ -2.39
SMC4-227ENST00000497984 PTRHD1Q6GMV3 140 aaKnown RBP0.12□□□□□ -2.39
SMC4-227ENST00000497984 PLPP5Q8NEB5 264 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 OR8J2Q8NGG1 315 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 OR52L1Q8NGH7 329 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 FAM172AQ8WUF8 416 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 LINC00052Q96N35 136 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 GPER1Q99527 375 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 TMEM126AQ9H061 195 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 TVP23BQ9NYZ1 205 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 ORMDL1Q9P0S3 153 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 ANAPC1Q9H1A4 1944 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 PIK3C2GO75747 1445 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 CACNA1AO00555 2505 aa0.12□□□□□ -2.39
SMC4-227ENST00000497984 PEAK1Q9H792 1746 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 SMIM23A6NLE4 172 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 M0R378 163 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 PDE6DO43924 150 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 EIF5AP63241 154 aaKnown RBP0.11□□□□□ -2.39
SMC4-227ENST00000497984 EDDM3AQ14507 147 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 ZNF833PQ6ZTB9 187 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 GRINAQ7Z429 371 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 PDZD9Q8IXQ8 264 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 OR11H6Q8NGC7 330 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 OR51A2Q8NGJ7 313 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 PSTPIP2Q9H939 334 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 CCDC144AA2RUR9 1427 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 RNF213Q63HN8 5207 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 RP1P56715 2156 aa0.11□□□□□ -2.39
SMC4-227ENST00000497984 RIMBP3CA6NJZ7 1639 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 RIMBP3BA6NNM3 1639 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 RIMBP3Q9UFD9 1639 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 KIAA1109Q2LD37 5005 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 J3QRK9 145 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 RPP14O95059 124 aaKnown RBP0.1□□□□□ -2.39
SMC4-227ENST00000497984 CD2P06729 351 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 HIST1H3AP68431 136 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 H3F3AP84243 136 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 ITGB3BPQ13352 177 aaPredicted RBP0.1□□□□□ -2.39
SMC4-227ENST00000497984 KRTAP20-1Q3LI63 56 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 LINC00575Q6W349 94 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 ARL5BQ96KC2 179 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 TP53RKQ96S44 253 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 PRRT1Q99946 306 aa0.1□□□□□ -2.39
SMC4-227ENST00000497984 TRIM4Q9C037 500 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms