RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 FAM24BQ8N5W8 94 aa11.3□□□□□ -0.6
CDK9-203ENST00000480353 COQ8AQ8NI60 647 aa11.3□□□□□ -0.6
CDK9-203ENST00000480353 NUPR2A6NF83 97 aa11.29□□□□□ -0.6
CDK9-203ENST00000480353 SYNGR2O43760 224 aa11.29□□□□□ -0.6
CDK9-203ENST00000480353 USF2Q15853 346 aaPredicted RBP11.29□□□□□ -0.6
CDK9-203ENST00000480353 SIGLEC15Q6ZMC9 328 aa11.29□□□□□ -0.6
CDK9-203ENST00000480353 OR11H2Q8NH07 326 aa11.29□□□□□ -0.6
CDK9-203ENST00000480353 RNF125Q96EQ8 232 aa11.29□□□□□ -0.6
CDK9-203ENST00000480353 MAGT1Q9H0U3 335 aa11.29□□□□□ -0.6
CDK9-203ENST00000480353 SNRPGP15A8MWD9 76 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 PITX3O75364 302 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 LYZP61626 148 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 GAMTQ14353 236 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 BAK1Q16611 211 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 C4orf46Q504U0 113 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 TMEM41BQ5BJD5 291 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 GGNBP1Q5YKI7 109 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 NDUFA13Q9P0J0 144 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 KLK5Q9Y337 293 aaPredicted RBP11.28□□□□□ -0.6
CDK9-203ENST00000480353 CSMD3Q7Z407 3707 aa11.28□□□□□ -0.6
CDK9-203ENST00000480353 RYR3Q15413 4870 aa11.27□□□□□ -0.6
CDK9-203ENST00000480353 NDUFB6O95139 128 aa11.27□□□□□ -0.61
CDK9-203ENST00000480353 SPP1P10451 314 aa11.27□□□□□ -0.61
CDK9-203ENST00000480353 ACTL10Q5JWF8 245 aa11.27□□□□□ -0.61
CDK9-203ENST00000480353 SPANXN5Q5MJ07 72 aa11.27□□□□□ -0.61
CDK9-203ENST00000480353 MORN3Q6PF18 240 aaPredicted RBP11.27□□□□□ -0.61
CDK9-203ENST00000480353 GLMPQ8WWB7 406 aa11.27□□□□□ -0.61
CDK9-203ENST00000480353 C7orf50Q9BRJ6 194 aaKnown RBP11.27□□□□□ -0.61
CDK9-203ENST00000480353 FBXL17Q9UF56 701 aa11.27□□□□□ -0.61
CDK9-203ENST00000480353 STRAPQ9Y3F4 350 aaKnown RBP11.27□□□□□ -0.61
CDK9-203ENST00000480353 U3KQE9 123 aa11.27□□□□□ -0.61
CDK9-203ENST00000480353 C9orf170A2RU37 121 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 KNCNA6PVL3 124 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 BUB3O43684 328 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 OR4E1P0C645 316 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 S100A7P31151 101 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 AKR1C1Q04828 323 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 OR2F1Q13607 317 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 OR8G2PQ6IF36 304 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 DCANP1Q8TF63 244 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 NRN1Q9NPD7 142 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 TENM2Q9NT68 2774 aa11.26□□□□□ -0.61
CDK9-203ENST00000480353 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
CDK9-203ENST00000480353 ATF4P18848 351 aaPredicted RBP11.25□□□□□ -0.61
CDK9-203ENST00000480353 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
CDK9-203ENST00000480353 ZNF90Q03938 601 aa11.25□□□□□ -0.61
CDK9-203ENST00000480353 CNPY1Q3B7I2 92 aa11.25□□□□□ -0.61
CDK9-203ENST00000480353 TRGV9Q99603 122 aa11.25□□□□□ -0.61
CDK9-203ENST00000480353 LYSTQ99698 3801 aa11.25□□□□□ -0.61
CDK9-203ENST00000480353 MFFQ9GZY8 342 aa11.25□□□□□ -0.61
CDK9-203ENST00000480353 FLVCR2Q9UPI3 526 aa11.25□□□□□ -0.61
CDK9-203ENST00000480353 STARD9Q9P2P6 4700 aa11.25□□□□□ -0.61
CDK9-203ENST00000480353 AGRNO00468 2067 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 H3BP45 60 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 ADAP1O75689 374 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 SCGB1D2O95969 90 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 CFDP00746 253 aaPredicted RBP11.24□□□□□ -0.61
CDK9-203ENST00000480353 IL7P13232 177 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 ID1P41134 155 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 NKX2-1P43699 371 aaPredicted RBP11.24□□□□□ -0.61
CDK9-203ENST00000480353 CEMP1Q6PRD7 247 aaPredicted RBP11.24□□□□□ -0.61
CDK9-203ENST00000480353 TRPT1Q86TN4 253 aaKnown RBP11.24□□□□□ -0.61
CDK9-203ENST00000480353 OR8I2Q8N0Y5 310 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 C11orf45Q8TAV5 145 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 RAB40CQ96S21 281 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 PSENENQ9NZ42 101 aa11.24□□□□□ -0.61
CDK9-203ENST00000480353 SSSCA1O60232 199 aa11.23□□□□□ -0.61
CDK9-203ENST00000480353 ANXA7P20073 488 aaKnown RBP11.23□□□□□ -0.61
CDK9-203ENST00000480353 BPIFCQ8NFQ6 507 aa11.23□□□□□ -0.61
CDK9-203ENST00000480353 LINC00052Q96N35 136 aa11.23□□□□□ -0.61
CDK9-203ENST00000480353 C11orf68Q9H3H3 251 aaKnown RBP11.23□□□□□ -0.61
CDK9-203ENST00000480353 SEPSECSQ9HD40 501 aaKnown RBP11.23□□□□□ -0.61
CDK9-203ENST00000480353 DYNC2H1Q8NCM8 4307 aaKnown RBP11.23□□□□□ -0.61
CDK9-203ENST00000480353 IGKV1D-37A0A075B6S9 117 aa11.22□□□□□ -0.61
CDK9-203ENST00000480353 LY6G6CO95867 125 aa11.22□□□□□ -0.61
CDK9-203ENST00000480353 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDK9-203ENST00000480353 EWSR1Q01844 656 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDK9-203ENST00000480353 C1orf194Q5T5A4 169 aa11.22□□□□□ -0.61
CDK9-203ENST00000480353 PHLDA1Q8WV24 401 aaPredicted RBP11.22□□□□□ -0.61
CDK9-203ENST00000480353 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
CDK9-203ENST00000480353 DEFB4AO15263 64 aa11.21□□□□□ -0.61
CDK9-203ENST00000480353 ZNF846Q147U1 533 aa11.21□□□□□ -0.61
CDK9-203ENST00000480353 IAH1Q2TAA2 248 aaPredicted RBP11.21□□□□□ -0.61
CDK9-203ENST00000480353 ACOT7LQ6ZUV0 252 aa11.21□□□□□ -0.61
CDK9-203ENST00000480353 THAP8Q8NA92 274 aa11.21□□□□□ -0.61
CDK9-203ENST00000480353 TMEM147Q9BVK8 224 aa11.21□□□□□ -0.61
CDK9-203ENST00000480353 SLC25A22Q9H936 323 aa11.21□□□□□ -0.61
CDK9-203ENST00000480353 GSKIPQ9P0R6 139 aa11.21□□□□□ -0.61
CDK9-203ENST00000480353 LYRM1O43325 122 aa11.2□□□□□ -0.62
CDK9-203ENST00000480353 MIFP14174 115 aa11.2□□□□□ -0.62
CDK9-203ENST00000480353 ORM2P19652 201 aa11.2□□□□□ -0.62
CDK9-203ENST00000480353 GALR1P47211 349 aa11.2□□□□□ -0.62
CDK9-203ENST00000480353 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
CDK9-203ENST00000480353 ID3Q02535 119 aa11.2□□□□□ -0.62
CDK9-203ENST00000480353 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
CDK9-203ENST00000480353 OR1B1Q8NGR6 318 aa11.2□□□□□ -0.62
CDK9-203ENST00000480353 SDHCQ99643 169 aaPredicted RBP11.2□□□□□ -0.62
CDK9-203ENST00000480353 C20orf85Q9H1P6 137 aa11.2□□□□□ -0.62
CDK9-203ENST00000480353 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms