RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 MUC7Q8TAX7 377 aa16.85■□□□□ 0.29
TRAF4-211ENST00000478021 STRAPQ9Y3F4 350 aaKnown RBP16.85■□□□□ 0.29
TRAF4-211ENST00000478021 U3KQE9 123 aa16.85■□□□□ 0.29
TRAF4-211ENST00000478021 PRSS46E5RG02 174 aa16.84■□□□□ 0.29
TRAF4-211ENST00000478021 ZNF846Q147U1 533 aa16.84■□□□□ 0.29
TRAF4-211ENST00000478021 GRAMD2BQ96HH9 432 aa16.84■□□□□ 0.29
TRAF4-211ENST00000478021 PBDC1Q9BVG4 233 aa16.84■□□□□ 0.29
TRAF4-211ENST00000478021 WDR12Q9GZL7 423 aaKnown RBP16.84■□□□□ 0.29
TRAF4-211ENST00000478021 PSENENQ9NZ42 101 aa16.84■□□□□ 0.29
TRAF4-211ENST00000478021 GSKIPQ9P0R6 139 aa16.84■□□□□ 0.29
TRAF4-211ENST00000478021 FAM240BA0A1B0GVZ2 78 aa16.83■□□□□ 0.28
TRAF4-211ENST00000478021 H2AFB2P0C5Z0 115 aa16.83■□□□□ 0.28
TRAF4-211ENST00000478021 OR2F1Q13607 317 aa16.83■□□□□ 0.28
TRAF4-211ENST00000478021 MZT2BQ6NZ67 158 aa16.83■□□□□ 0.28
TRAF4-211ENST00000478021 ZBTB8BQ8NAP8 495 aaPredicted RBP16.83■□□□□ 0.28
TRAF4-211ENST00000478021 RNF125Q96EQ8 232 aa16.83■□□□□ 0.28
TRAF4-211ENST00000478021 NBEAL2Q6ZNJ1 2754 aa16.82■□□□□ 0.28
TRAF4-211ENST00000478021 APOC4P55056 127 aa16.82■□□□□ 0.28
TRAF4-211ENST00000478021 CMC4P56277 68 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-211ENST00000478021 ASAH1Q13510 395 aa16.82■□□□□ 0.28
TRAF4-211ENST00000478021 C16orf54Q6UWD8 224 aa16.82■□□□□ 0.28
TRAF4-211ENST00000478021 ZNF431Q8TF32 576 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-211ENST00000478021 GLMPQ8WWB7 406 aa16.82■□□□□ 0.28
TRAF4-211ENST00000478021 DNAH7Q8WXX0 4024 aa16.81■□□□□ 0.28
TRAF4-211ENST00000478021 IGKV1OR2-108A0A075B7D4 117 aa16.81■□□□□ 0.28
TRAF4-211ENST00000478021 C3orf84H3BNL1 204 aa16.81■□□□□ 0.28
TRAF4-211ENST00000478021 UPK1BO75841 260 aa16.81■□□□□ 0.28
TRAF4-211ENST00000478021 DEFB131AP59861 70 aa16.81■□□□□ 0.28
TRAF4-211ENST00000478021 LEMD1Q68G75 181 aa16.81■□□□□ 0.28
TRAF4-211ENST00000478021 TRAV2A0A0B4J234 112 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 FAM25EA8MYX2 175 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 K7EQG2 157 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 CCNKO75909 580 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 LYZP61626 148 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 OR8G2PQ6IF36 304 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 ACOT7LQ6ZUV0 252 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 THAP8Q8NA92 274 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 TRGV9Q99603 122 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 OVOL2Q9BRP0 275 aa16.8■□□□□ 0.28
TRAF4-211ENST00000478021 PAX9P55771 341 aa16.79■□□□□ 0.28
TRAF4-211ENST00000478021 IFITM3Q01628 133 aa16.79■□□□□ 0.28
TRAF4-211ENST00000478021 AKR1C1Q04828 323 aa16.79■□□□□ 0.28
TRAF4-211ENST00000478021 DEFB135Q30KP9 77 aa16.79■□□□□ 0.28
TRAF4-211ENST00000478021 C12orf45Q8N5I9 185 aaPredicted RBP16.79■□□□□ 0.28
TRAF4-211ENST00000478021 SMIM8Q96KF7 97 aa16.79■□□□□ 0.28
TRAF4-211ENST00000478021 RCL1Q9Y2P8 373 aaKnown RBP16.79■□□□□ 0.28
TRAF4-211ENST00000478021 HELTA6NFD8 242 aa16.78■□□□□ 0.28
TRAF4-211ENST00000478021 BUB3O43684 328 aa16.78■□□□□ 0.28
TRAF4-211ENST00000478021 MBPP02686 304 aaPredicted RBP16.78■□□□□ 0.28
TRAF4-211ENST00000478021 FABP1P07148 127 aa16.78■□□□□ 0.28
TRAF4-211ENST00000478021 ZNF688P0C7X2 276 aa16.78■□□□□ 0.28
TRAF4-211ENST00000478021 LYL1P12980 280 aa16.78■□□□□ 0.28
TRAF4-211ENST00000478021 EIF2B2P49770 351 aaKnown RBP16.78■□□□□ 0.28
TRAF4-211ENST00000478021 ZFAND6Q6FIF0 208 aa16.78■□□□□ 0.28
TRAF4-211ENST00000478021 STPG3Q8N7X2 389 aa16.78■□□□□ 0.28
TRAF4-211ENST00000478021 BATF3Q9NR55 127 aa16.78■□□□□ 0.28
TRAF4-211ENST00000478021 KIR2DL5BA0A0G2JN68 375 aa16.77■□□□□ 0.28
TRAF4-211ENST00000478021 KIR2DL5BA0A0G2JPC4 375 aa16.77■□□□□ 0.28
TRAF4-211ENST00000478021 SMCO3A2RU48 225 aa16.77■□□□□ 0.28
TRAF4-211ENST00000478021 C5orf51A6NDU8 294 aa16.77■□□□□ 0.28
TRAF4-211ENST00000478021 METTL15P1P0C7V9 234 aa16.77■□□□□ 0.28
TRAF4-211ENST00000478021 KIR2DL5AQ8N109 375 aa16.77■□□□□ 0.28
TRAF4-211ENST00000478021 KIR2DL5BQ8NHK3 375 aa16.77■□□□□ 0.28
TRAF4-211ENST00000478021 ENKURQ8TC29 256 aa16.77■□□□□ 0.28
TRAF4-211ENST00000478021 DCANP1Q8TF63 244 aa16.77■□□□□ 0.28
TRAF4-211ENST00000478021 PMS2P5A8MQ11 134 aa16.76■□□□□ 0.27
TRAF4-211ENST00000478021 SNRPGP15A8MWD9 76 aa16.76■□□□□ 0.27
TRAF4-211ENST00000478021 RRAS2P62070 204 aaPredicted RBP16.76■□□□□ 0.27
TRAF4-211ENST00000478021 CASC10Q5T4H9 136 aa16.76■□□□□ 0.27
TRAF4-211ENST00000478021 SIGLEC15Q6ZMC9 328 aa16.76■□□□□ 0.27
TRAF4-211ENST00000478021 RAB40CQ96S21 281 aa16.76■□□□□ 0.27
TRAF4-211ENST00000478021 LSM5Q9Y4Y9 91 aaKnown RBP16.76■□□□□ 0.27
TRAF4-211ENST00000478021 UBE2CO00762 179 aa16.75■□□□□ 0.27
TRAF4-211ENST00000478021 GATA2P23769 480 aaPredicted RBP16.75■□□□□ 0.27
TRAF4-211ENST00000478021 TMEM14EPQ6UXP3 125 aa16.75■□□□□ 0.27
TRAF4-211ENST00000478021 SPRY2O43597 315 aa16.74■□□□□ 0.27
TRAF4-211ENST00000478021 AP2S1P53680 142 aaPredicted RBP16.74■□□□□ 0.27
TRAF4-211ENST00000478021 TMEM182Q6ZP80 229 aaPredicted RBP16.74■□□□□ 0.27
TRAF4-211ENST00000478021 Q6ZWC4 215 aa16.74■□□□□ 0.27
TRAF4-211ENST00000478021 PPP1R14BQ96C90 147 aa16.74■□□□□ 0.27
TRAF4-211ENST00000478021 C7orf66A4D0T2 115 aa16.73■□□□□ 0.27
TRAF4-211ENST00000478021 KNCNA6PVL3 124 aa16.73■□□□□ 0.27
TRAF4-211ENST00000478021 TSC22D2O75157 780 aa16.73■□□□□ 0.27
TRAF4-211ENST00000478021 NUP62P37198 522 aaPredicted RBP16.73■□□□□ 0.27
TRAF4-211ENST00000478021 TAS2R30P59541 319 aa16.73■□□□□ 0.27
TRAF4-211ENST00000478021 TMEM144Q7Z5S9 345 aa16.73■□□□□ 0.27
TRAF4-211ENST00000478021 CSTL1Q9H114 145 aa16.73■□□□□ 0.27
TRAF4-211ENST00000478021 NRN1Q9NPD7 142 aa16.73■□□□□ 0.27
TRAF4-211ENST00000478021 AGRNO00468 2067 aa16.73■□□□□ 0.27
TRAF4-211ENST00000478021 K7EPK0 472 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 L7N2F9 121 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 IL5P05113 134 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 VAMP2P63027 116 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 DLK1P80370 383 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 PSMG4Q5JS54 123 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 STHQ8IWL8 128 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 BPIFCQ8NFQ6 507 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 RNF183Q96D59 192 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 C2orf50Q96LR7 162 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 PFDN2Q9UHV9 154 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms