RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 XCL2Q9UBD3 114 aa9.59□□□□□ -0.87
CPSF4-210ENST00000469897 SCP2D1Q9UJQ7 156 aa9.59□□□□□ -0.87
CPSF4-210ENST00000469897 TRAV10A0A0B4J240 114 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 H3BMM0 161 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 GSTZ1O43708 216 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-210ENST00000469897 CCR6P51684 374 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 NUTF2P61970 127 aaKnown RBP9.58□□□□□ -0.88
CPSF4-210ENST00000469897 SUPT4H1P63272 117 aaKnown RBP9.58□□□□□ -0.88
CPSF4-210ENST00000469897 SMCO1Q147U7 214 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 GSG1LQ6UXU4 331 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 SCGB3A2Q96PL1 93 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 PBDC1Q9BVG4 233 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 HSPB7Q9UBY9 170 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 CACFD1Q9UGQ2 172 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 RSL24D1Q9UHA3 163 aaKnown RBP9.58□□□□□ -0.88
CPSF4-210ENST00000469897 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
CPSF4-210ENST00000469897 IGHV4-4A0A075B6R2 117 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 IGKV3-20P01619 116 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 TNFSF8P32971 234 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 DEFB1P60022 68 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 ZNF90Q03938 601 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 GAMTQ14353 236 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 C12orf74Q32Q52 190 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 RABL2AQ9UBK7 228 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-210ENST00000469897 CELA1Q9UNI1 258 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 RABL2BQ9UNT1 228 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 DNAH10Q8IVF4 4471 aa9.57□□□□□ -0.88
CPSF4-210ENST00000469897 FRAS1Q86XX4 4008 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 FABP12A6NFH5 140 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 ZFP92A6NM28 416 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 GPX4P36969 197 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-210ENST00000469897 TMBIM6P55061 237 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 FXYD7P58549 80 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 OR1S1Q8NH92 325 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 RAB2BQ8WUD1 216 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 RNF125Q96EQ8 232 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 LINC00052Q96N35 136 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 SOSTQ9BQB4 213 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 C1QTNF4Q9BXJ3 329 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 KRTAP17-1Q9BYP8 105 aa9.56□□□□□ -0.88
CPSF4-210ENST00000469897 SEPSECSQ9HD40 501 aaKnown RBP9.56□□□□□ -0.88
CPSF4-210ENST00000469897 CCDC59Q9P031 241 aaKnown RBP9.56□□□□□ -0.88
CPSF4-210ENST00000469897 IGKV1D-37A0A075B6S9 117 aa9.55□□□□□ -0.88
CPSF4-210ENST00000469897 DEFB131BA0A096LNP1 70 aa9.55□□□□□ -0.88
CPSF4-210ENST00000469897 SNRPGP15A8MWD9 76 aa9.55□□□□□ -0.88
CPSF4-210ENST00000469897 ANXA3P12429 323 aa9.55□□□□□ -0.88
CPSF4-210ENST00000469897 NKX2-1P43699 371 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-210ENST00000469897 GDF5OSQ5U4N7 250 aa9.55□□□□□ -0.88
CPSF4-210ENST00000469897 SCRT1Q9BWW7 348 aa9.55□□□□□ -0.88
CPSF4-210ENST00000469897 WDR12Q9GZL7 423 aaKnown RBP9.55□□□□□ -0.88
CPSF4-210ENST00000469897 SLIRPQ9GZT3 109 aaKnown RBP9.55□□□□□ -0.88
CPSF4-210ENST00000469897 IAPPP10997 89 aa9.54□□□□□ -0.88
CPSF4-210ENST00000469897 HLA-DRB4P13762 266 aa9.54□□□□□ -0.88
CPSF4-210ENST00000469897 EMP1P54849 157 aa9.54□□□□□ -0.88
CPSF4-210ENST00000469897 ATP5IP56385 69 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-210ENST00000469897 OR2F1Q13607 317 aa9.54□□□□□ -0.88
CPSF4-210ENST00000469897 TMED4Q7Z7H5 227 aa9.54□□□□□ -0.88
CPSF4-210ENST00000469897 SLC35E1Q96K37 410 aa9.54□□□□□ -0.88
CPSF4-210ENST00000469897 RNF126Q9BV68 326 aa9.54□□□□□ -0.88
CPSF4-210ENST00000469897 PFDN2Q9UHV9 154 aa9.54□□□□□ -0.88
CPSF4-210ENST00000469897 PAIP2BQ9ULR5 123 aaKnown RBP9.54□□□□□ -0.88
CPSF4-210ENST00000469897 HLA-DRB4X5D2U9 266 aa9.54□□□□□ -0.88
CPSF4-210ENST00000469897 VPS13DQ5THJ4 4388 aa9.53□□□□□ -0.88
CPSF4-210ENST00000469897 IGHV3OR16-12A0A075B7B8 117 aa9.53□□□□□ -0.88
CPSF4-210ENST00000469897 ID1P41134 155 aa9.53□□□□□ -0.88
CPSF4-210ENST00000469897 LYZP61626 148 aa9.53□□□□□ -0.88
CPSF4-210ENST00000469897 SRPXP78539 464 aa9.53□□□□□ -0.88
CPSF4-210ENST00000469897 OR8G2PQ6IF36 304 aa9.53□□□□□ -0.88
CPSF4-210ENST00000469897 OR4B1Q8NGF8 309 aa9.53□□□□□ -0.88
CPSF4-210ENST00000469897 MCFD2Q8NI22 146 aa9.53□□□□□ -0.88
CPSF4-210ENST00000469897 PITX3O75364 302 aa9.52□□□□□ -0.89
CPSF4-210ENST00000469897 SPART-AS1P0CW21 52 aa9.52□□□□□ -0.89
CPSF4-210ENST00000469897 RAB11AP62491 216 aa9.52□□□□□ -0.89
CPSF4-210ENST00000469897 C1orf194Q5T5A4 169 aa9.52□□□□□ -0.89
CPSF4-210ENST00000469897 ZNF705AQ6ZN79 300 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-210ENST00000469897 PPP1R14BQ96C90 147 aa9.52□□□□□ -0.89
CPSF4-210ENST00000469897 BCL7BQ9BQE9 202 aa9.52□□□□□ -0.89
CPSF4-210ENST00000469897 SAV1Q9H4B6 383 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-210ENST00000469897 PLA2G2EQ9NZK7 142 aa9.52□□□□□ -0.89
CPSF4-210ENST00000469897 ZNF705FA8MVS1 300 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-210ENST00000469897 F6UB75 175 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 H3BMQ9 156 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 SOCS3O14543 225 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 FABP1P07148 127 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 ZNF705DP0CH99 300 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-210ENST00000469897 ZNF705BP0CI00 300 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-210ENST00000469897 NUP62P37198 522 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-210ENST00000469897 PYDC2Q56P42 97 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 TMEM128Q5BJH2 165 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 FOXI2Q6ZQN5 318 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 OR8I2Q8N0Y5 310 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 COQ8AQ8NI60 647 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 NEU1Q99519 415 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 TRGV9Q99603 122 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 MAGT1Q9H0U3 335 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 SLC35B3Q9H1N7 401 aa9.51□□□□□ -0.89
CPSF4-210ENST00000469897 IGKV1OR2-108A0A075B7D4 117 aa9.5□□□□□ -0.89
CPSF4-210ENST00000469897 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
CPSF4-210ENST00000469897 VAMP1P23763 118 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms