RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 HIST2H2BCQ6DN03 193 aa11.51□□□□□ -0.57
HDAC6-213ENST00000462730 PRO1933Q9H354 126 aa11.51□□□□□ -0.57
HDAC6-213ENST00000462730 MRPL36Q9P0J6 103 aaKnown RBP11.51□□□□□ -0.57
HDAC6-213ENST00000462730 F11RQ9Y624 299 aaKnown RBP11.51□□□□□ -0.57
HDAC6-213ENST00000462730 CXorf1O96002 111 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 AMBPP02760 352 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 MSMBP08118 114 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 SAA4P35542 130 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 DEFB113Q30KQ7 82 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 ETFRF1Q6IPR1 90 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 Q8N6K4 173 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 OR4F5Q8NH21 305 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 AJUBAQ96IF1 538 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 OR4F4Q96R69 305 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 SRSF8Q9BRL6 282 aaKnown RBP11.5□□□□□ -0.57
HDAC6-213ENST00000462730 SEPSECSQ9HD40 501 aaKnown RBP11.5□□□□□ -0.57
HDAC6-213ENST00000462730 BEX4Q9NWD9 120 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-213ENST00000462730 ABCA12Q86UK0 2595 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 ZFHX3Q15911 3703 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 NPFFO15130 113 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 TMEM11P17152 192 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 UBE2G2P60604 165 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 EBI3Q14213 229 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 FXYD3Q14802 87 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 THAP8Q8NA92 274 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 ANAPC16Q96DE5 110 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 SLC25A33Q9BSK2 321 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 ELOVL1Q9BW60 279 aa11.5□□□□□ -0.57
HDAC6-213ENST00000462730 A0A096LNT2 108 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 IGHV3-21A0A0B4J1V1 117 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
HDAC6-213ENST00000462730 CRYGCP07315 174 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 GZMBP10144 247 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 NUTF2P61970 127 aaKnown RBP11.49□□□□□ -0.57
HDAC6-213ENST00000462730 IQCJQ1A5X6 159 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 FAM78BQ5VT40 261 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 MIR17HGQ75NE6 70 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 TMEM18Q96B42 140 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 FUT9Q9Y231 359 aa11.49□□□□□ -0.57
HDAC6-213ENST00000462730 HELZ2Q9BYK8 2649 aaKnown RBP11.49□□□□□ -0.57
HDAC6-213ENST00000462730 IGKV1D-37A0A075B6S9 117 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 CENPVL3A0A0U1RRI6 287 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 A0A1W2PPQ1 181 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 TCRBV4S1A1TA0A5B7 111 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 M0QZK8 103 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 CORTO00230 105 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 GGCTO75223 188 aaKnown RBP11.48□□□□□ -0.57
HDAC6-213ENST00000462730 GCHFRP30047 84 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 FAM120AOSQ5T036 256 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 RUSC1-AS1Q66K80 236 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 C22orf15Q8WYQ4 148 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 TRAV40A0A0B4J280 105 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 B4DSR2 109 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 C11orf94C9JXX5 98 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 MT-CO2P00403 227 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 TYMSP04818 313 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 SRP14P37108 136 aaKnown RBP11.48□□□□□ -0.57
HDAC6-213ENST00000462730 LRRC75A-AS1Q8N1F1 130 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 FAM103A1Q9BTL3 118 aaKnown RBP11.48□□□□□ -0.57
HDAC6-213ENST00000462730 WNT10AQ9GZT5 417 aa11.48□□□□□ -0.57
HDAC6-213ENST00000462730 OR5G3P0C626 314 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 BRS3P32247 399 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 ZNF90Q03938 601 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 ACTL10Q5JWF8 245 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 Q5PR19 223 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 IGHV3OR16-10A0A075B7F0 116 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 ATP5G3P48201 142 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 ARPC1AQ92747 370 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 C19orf24Q9BVV8 132 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 TNFRSF19Q9NS68 423 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 HIF1ANQ9NWT6 349 aa11.47□□□□□ -0.57
HDAC6-213ENST00000462730 TECRQ9NZ01 308 aaKnown RBP11.47□□□□□ -0.57
HDAC6-213ENST00000462730 APCP25054 2843 aa11.46□□□□□ -0.57
HDAC6-213ENST00000462730 MAP1AP78559 2803 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-213ENST00000462730 SELENOTP62341 195 aa11.46□□□□□ -0.58
HDAC6-213ENST00000462730 CX3CL1P78423 397 aa11.46□□□□□ -0.58
HDAC6-213ENST00000462730 MAPK1IP1LQ8NDC0 245 aa11.46□□□□□ -0.58
HDAC6-213ENST00000462730 NAV2Q8IVL1 2488 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 PSMB11A5LHX3 300 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 COX7A2P2O60397 106 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 NDPQ00604 133 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 USF2Q15853 346 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-213ENST00000462730 ZNF562Q6V9R5 426 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 TMEM116Q8NCL8 245 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 TMEM37Q8WXS4 190 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 IMMP2LQ96T52 175 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 TRGV9Q99603 122 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 MRPL32Q9BYC8 188 aaKnown RBP11.45□□□□□ -0.58
HDAC6-213ENST00000462730 C7orf69Q9H7B7 122 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 IGHV1-69DA0A0B4J2H0 117 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 TMEM238LA0A1B0GVL6 79 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 RNF223E7ERA6 249 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 I3L2K1 104 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 IGHV1-69P01742 117 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 CD99P14209 185 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 NPPCP23582 126 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms