RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PMS2P11Q13670 270 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 GGNBP1Q5YKI7 109 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 C16orf54Q6UWD8 224 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 DCANP1Q8TF63 244 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 RNF125Q96EQ8 232 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 SDHCQ99643 169 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-204ENST00000462258 CSTL1Q9H114 145 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 PAIP2BQ9ULR5 123 aaKnown RBP7.48□□□□□ -1.21
SF3A3-204ENST00000462258 C9orf170A2RU37 121 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 CXorf65A6NEN9 183 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 CENPXA8MT69 81 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 SYNGR2O43760 224 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 IL7P13232 177 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 BTCP35070 178 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 GPX4P36969 197 aaPredicted RBP7.47□□□□□ -1.21
SF3A3-204ENST00000462258 NUP62P37198 522 aaPredicted RBP7.47□□□□□ -1.21
SF3A3-204ENST00000462258 EWSR1Q01844 656 aaKnown RBP eCLIP7.47□□□□□ -1.21
SF3A3-204ENST00000462258 DHRS2Q13268 280 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 GAMTQ14353 236 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 STHQ8IWL8 128 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 TMEM217Q8N7C4 229 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 OR51G1Q8NGK1 321 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 GATAD1Q8WUU5 269 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 CIB3Q96Q77 187 aaPredicted RBP7.47□□□□□ -1.21
SF3A3-204ENST00000462258 C7orf50Q9BRJ6 194 aaKnown RBP7.47□□□□□ -1.21
SF3A3-204ENST00000462258 PBDC1Q9BVG4 233 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 MAGT1Q9H0U3 335 aa7.47□□□□□ -1.21
SF3A3-204ENST00000462258 EPPK1P58107 5090 aaKnown RBP7.46□□□□□ -1.21
SF3A3-204ENST00000462258 IGKV1D-37A0A075B6S9 117 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 H3BP45 60 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 WRBO00258 174 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 BUB3O43684 328 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 ADAP1O75689 374 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 FABP1P07148 127 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 AP2S1P53680 142 aaPredicted RBP7.46□□□□□ -1.22
SF3A3-204ENST00000462258 LYZP61626 148 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 RPP30P78346 268 aaKnown RBP7.46□□□□□ -1.22
SF3A3-204ENST00000462258 ZNF90Q03938 601 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 OR8G2PQ6IF36 304 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 SIGLEC15Q6ZMC9 328 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 TRPT1Q86TN4 253 aaKnown RBP7.46□□□□□ -1.22
SF3A3-204ENST00000462258 COQ8AQ8NI60 647 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 NRN1Q9NPD7 142 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 NDUFA13Q9P0J0 144 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 FLVCR2Q9UPI3 526 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 AGRNO00468 2067 aa7.46□□□□□ -1.22
SF3A3-204ENST00000462258 NUPR2A6NF83 97 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 KNCNA6PVL3 124 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 PRSS46E5RG02 174 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 OR4E1P0C645 316 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 ATF4P18848 351 aaPredicted RBP7.45□□□□□ -1.22
SF3A3-204ENST00000462258 ANXA7P20073 488 aaKnown RBP7.45□□□□□ -1.22
SF3A3-204ENST00000462258 C4BPBP20851 252 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 C4orf46Q504U0 113 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 PSMG4Q5JS54 123 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 THAP8Q8NA92 274 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 RARRES2Q99969 163 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 PFDN2Q9UHV9 154 aa7.45□□□□□ -1.22
SF3A3-204ENST00000462258 IGKV1OR2-108A0A075B7D4 117 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 SSSCA1O60232 199 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 IFNA21P01568 189 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 SPP1P10451 314 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 SNRPD3P62318 126 aaKnown RBP7.44□□□□□ -1.22
SF3A3-204ENST00000462258 OR2F1Q13607 317 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 ACTL10Q5JWF8 245 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 SPANXN5Q5MJ07 72 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 MORN3Q6PF18 240 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-204ENST00000462258 ACOT7LQ6ZUV0 252 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 OR11H2Q8NH07 326 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 TRGV9Q99603 122 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 C20orf85Q9H1P6 137 aa7.44□□□□□ -1.22
SF3A3-204ENST00000462258 C11orf68Q9H3H3 251 aaKnown RBP7.44□□□□□ -1.22
SF3A3-204ENST00000462258 NKX2-1P43699 371 aaPredicted RBP7.43□□□□□ -1.22
SF3A3-204ENST00000462258 POLR2GP62487 172 aaKnown RBP eCLIP7.43□□□□□ -1.22
SF3A3-204ENST00000462258 AKR1C1Q04828 323 aa7.43□□□□□ -1.22
SF3A3-204ENST00000462258 TMEM41BQ5BJD5 291 aa7.43□□□□□ -1.22
SF3A3-204ENST00000462258 PPP1R14BQ96C90 147 aa7.43□□□□□ -1.22
SF3A3-204ENST00000462258 SEPSECSQ9HD40 501 aaKnown RBP7.43□□□□□ -1.22
SF3A3-204ENST00000462258 STRAPQ9Y3F4 350 aaKnown RBP7.43□□□□□ -1.22
SF3A3-204ENST00000462258 SNRPGP15A8MWD9 76 aa7.42□□□□□ -1.22
SF3A3-204ENST00000462258 LYRM1O43325 122 aa7.42□□□□□ -1.22
SF3A3-204ENST00000462258 SCGB1D2O95969 90 aa7.42□□□□□ -1.22
SF3A3-204ENST00000462258 GIG44P09565 113 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-204ENST00000462258 ID3Q02535 119 aa7.42□□□□□ -1.22
SF3A3-204ENST00000462258 IAH1Q2TAA2 248 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-204ENST00000462258 CNPY1Q3B7I2 92 aa7.42□□□□□ -1.22
SF3A3-204ENST00000462258 MITD1Q8WV92 249 aa7.42□□□□□ -1.22
SF3A3-204ENST00000462258 FBXL17Q9UF56 701 aa7.42□□□□□ -1.22
SF3A3-204ENST00000462258 SMCO3A2RU48 225 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 PLA2G10O15496 165 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 CFDP00746 253 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-204ENST00000462258 C1orf194Q5T5A4 169 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 CEMP1Q6PRD7 247 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-204ENST00000462258 ZBTB8BQ8NAP8 495 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-204ENST00000462258 Q8NAQ8 132 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 BPIFCQ8NFQ6 507 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 LINC00476Q8WZB0 136 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 RAB40CQ96S21 281 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 CCDC32Q9BV29 185 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms