RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 OR1P1Q8NH06 330 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 FAM167A-AS1Q96KT0 104 aa8.51□□□□□ -1.05
PKP4-206ENST00000452162 POLR3KQ9Y2Y1 108 aaPredicted RBP8.51□□□□□ -1.05
PKP4-206ENST00000452162 PHOX2AO14813 284 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 TGOLN2O43493 480 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 TRGC2P03986 189 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 GALR1P47211 349 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 ZNF90Q03938 601 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 MORN5Q5VZ52 161 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 ETFRF1Q6IPR1 90 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 C1orf122Q6ZSJ8 110 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 KIR3DL3Q8N743 410 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 NECAP1Q8NC96 275 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 MISP3Q96FF7 219 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 ELOVL1Q9BW60 279 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 SLC25A2Q9BXI2 301 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 DNAJC4Q9NNZ3 241 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 F11RQ9Y624 299 aaKnown RBP8.5□□□□□ -1.05
PKP4-206ENST00000452162 PGPEP1LA6NFU8 196 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 FCN1O00602 326 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 OR7C2O60412 319 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 AVPP01185 164 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 SELENOTP62341 195 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 FAM120AOSQ5T036 256 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 PATE2Q6UY27 113 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 LHFPL4Q7Z7J7 247 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 SRSF12Q8WXF0 261 aaKnown RBP8.5□□□□□ -1.05
PKP4-206ENST00000452162 UHRF2Q96PU4 802 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 OR5B12Q96R08 314 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 DMRT1Q9Y5R6 373 aa8.5□□□□□ -1.05
PKP4-206ENST00000452162 PLXNB1O43157 2135 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 COX7A2P2O60397 106 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 APELAP0DMC3 54 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 CEACAM3P40198 252 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 OR5T1Q8NG75 326 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 OR1L4Q8NGR5 311 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 PFDN5Q99471 154 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 C12orf57Q99622 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 AURKAIP1Q9NWT8 199 aaPredicted RBP8.49□□□□□ -1.05
PKP4-206ENST00000452162 HILPDAQ9Y5L2 63 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 TRAV5A0A0B4J249 113 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 CORTO00230 105 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST1H2BKO60814 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST1H2BJP06899 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST1H2BOP23527 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 S100PP25815 95 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST1H2BBP33778 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 SRP14P37108 136 aaKnown RBP8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST1H2BDP58876 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST1H2BCP62807 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST2H2BEQ16778 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.49□□□□□ -1.05
PKP4-206ENST00000452162 TMEM116Q8NCL8 245 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 NPBQ8NG41 125 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST1H2BHQ93079 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 TRGV9Q99603 122 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST1H2BNQ99877 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 HIST1H2BMQ99879 126 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 SRSF8Q9BRL6 282 aaKnown RBP8.49□□□□□ -1.05
PKP4-206ENST00000452162 SRD5A3Q9H8P0 318 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 TMEM160Q9NX00 188 aa8.49□□□□□ -1.05
PKP4-206ENST00000452162 IGHV2-70DA0A0C4DH43 119 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 A0A1W2PRE2 83 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 LINC00587B1AMM8 73 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 GGTLC3B5MD39 225 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 C9JCJ5 164 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 GGCTO75223 188 aaKnown RBP8.48□□□□□ -1.05
PKP4-206ENST00000452162 NDUFA3O95167 84 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 OR10J4P0C629 311 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 LGALS4P56470 323 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 C10orf113Q5VZT2 155 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 VMO1Q7Z5L0 202 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 OR4X1Q8NH49 305 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 OCC1Q8TAD7 63 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 C7orf69Q9H7B7 122 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 TNFRSF19Q9NS68 423 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 LY96Q9Y6Y9 160 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 PPP1R2P9O14990 202 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 NBR2O15453 112 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 CRLF1O75462 422 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 MOSP00540 346 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 HOXB4P17483 251 aaPredicted RBP8.48□□□□□ -1.05
PKP4-206ENST00000452162 PCP4P48539 62 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 PLGLAQ15195 96 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 MMDQ15546 238 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 FBLN7Q53RD9 439 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 OR5AU1Q8NGC0 362 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 FRZBQ92765 325 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 SFRP2Q96HF1 295 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 SIRPDQ9H106 197 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 ZNF355PQ9NSJ1 428 aa8.48□□□□□ -1.05
PKP4-206ENST00000452162 A0A1W2PRD5 423 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 A0A1W2PRF3 423 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 A0A1W2PRM7 423 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 GATCO43716 136 aaKnown RBP8.47□□□□□ -1.05
PKP4-206ENST00000452162 HOXA5P20719 270 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 GATA3P23771 443 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 PAX8Q06710 450 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 C22orf15Q8WYQ4 148 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms