RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RABAC1Q9UI14 185 aa9.41□□□□□ -0.9
PRPF40A-203ENST00000448428 NBEAL2Q6ZNJ1 2754 aa9.41□□□□□ -0.9
PRPF40A-203ENST00000448428 IGKV1OR2-108A0A075B7D4 117 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 KIR2DL5BA0A0G2JN68 375 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 KIR2DL5BA0A0G2JPC4 375 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 H3BP45 60 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 K7EQG2 157 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 UBE2CO00762 179 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 BUB3O43684 328 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 PAX9P55771 341 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 DEFB131AP59861 70 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 Q6ZWC4 215 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 KIR2DL5AQ8N109 375 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 STPG3Q8N7X2 389 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 KIR2DL5BQ8NHK3 375 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 DCANP1Q8TF63 244 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 GLMPQ8WWB7 406 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 RNF125Q96EQ8 232 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 NUDT15Q9NV35 164 aa9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 STRAPQ9Y3F4 350 aaKnown RBP9.4□□□□□ -0.9
PRPF40A-203ENST00000448428 HELTA6NFD8 242 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 SPRY2O43597 315 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 H2AFB2P0C5Z0 115 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 OR2F1Q13607 317 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 IAH1Q2TAA2 248 aaPredicted RBP9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 LEMD1Q68G75 181 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 THAP8Q8NA92 274 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 SMIM8Q96KF7 97 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 TRGV9Q99603 122 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 PBDC1Q9BVG4 233 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 PSENENQ9NZ42 101 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 GSKIPQ9P0R6 139 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 TBC1D24Q9ULP9 559 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 AGRNO00468 2067 aa9.39□□□□□ -0.91
PRPF40A-203ENST00000448428 FAM240BA0A1B0GVZ2 78 aa9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 SNRPGP15A8MWD9 76 aa9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 SSSCA1O60232 199 aa9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 EIF2B2P49770 351 aaKnown RBP9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 AP2S1P53680 142 aaPredicted RBP9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 DEFB135Q30KP9 77 aa9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 ZBTB8BQ8NAP8 495 aaPredicted RBP9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 ZNF431Q8TF32 576 aaPredicted RBP9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 SEC22CQ9BRL7 303 aa9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 CSTL1Q9H114 145 aa9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 TP53TG1Q9Y2A0 90 aa9.38□□□□□ -0.91
PRPF40A-203ENST00000448428 PMS2P5A8MQ11 134 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 CCSO14618 274 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 SCGB1D2O95969 90 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 FABP1P07148 127 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 ZNF688P0C7X2 276 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 LYZP61626 148 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 ASAH1Q13510 395 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 ZNF846Q147U1 533 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 OR8G2PQ6IF36 304 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 MZT2BQ6NZ67 158 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 RNF183Q96D59 192 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 PTTG2Q9NZH5 202 aa9.37□□□□□ -0.91
PRPF40A-203ENST00000448428 UPK1BO75841 260 aa9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 CCNKO75909 580 aa9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 MBPP02686 304 aaPredicted RBP9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 IFITM3Q01628 133 aa9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 SIGLEC15Q6ZMC9 328 aa9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 TMEM182Q6ZP80 229 aaPredicted RBP9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 ACOT7LQ6ZUV0 252 aa9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 C12orf45Q8N5I9 185 aaPredicted RBP9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 RAB40CQ96S21 281 aa9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 RCL1Q9Y2P8 373 aaKnown RBP9.36□□□□□ -0.91
PRPF40A-203ENST00000448428 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 FAM25EA8MYX2 175 aa9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 METTL15P1P0C7V9 234 aa9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 GATA2P23769 480 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 TAS2R30P59541 319 aa9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 AKR1C1Q04828 323 aa9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 TMEM14EPQ6UXP3 125 aa9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 TMEM144Q7Z5S9 345 aa9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 WDR12Q9GZL7 423 aaKnown RBP9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 NRN1Q9NPD7 142 aa9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 PFDN2Q9UHV9 154 aa9.35□□□□□ -0.91
PRPF40A-203ENST00000448428 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 SMCO3A2RU48 225 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 C7orf66A4D0T2 115 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 C5orf51A6NDU8 294 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 TSC22D2O75157 780 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 CFDP00746 253 aaPredicted RBP9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 NUP62P37198 522 aaPredicted RBP9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 PSMG4Q5JS54 123 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 C1orf194Q5T5A4 169 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 TRPT1Q86TN4 253 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 STHQ8IWL8 128 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 IL17DQ8TAD2 202 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 BATF3Q9NR55 127 aa9.34□□□□□ -0.91
PRPF40A-203ENST00000448428 IL5P05113 134 aa9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 RRAS2P62070 204 aaPredicted RBP9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 DLK1P80370 383 aa9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 EWSR1Q01844 656 aaKnown RBP eCLIP9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 ARL16Q0P5N6 197 aa9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 ACTL10Q5JWF8 245 aa9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 BPIFCQ8NFQ6 507 aa9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 OR10P1Q8NGE3 313 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms