RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 ZNF418Q8TF45 676 aaPredicted RBP5.24□□□□□ -1.57
CNOT1-202ENST00000441024 GEMIN7Q9H840 131 aaKnown RBP5.24□□□□□ -1.57
CNOT1-202ENST00000441024 TMEM8BA6NDV4 472 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 C15orf62A8K5M9 175 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 LYNX1G3V0Z9 82 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST1H2BKO60814 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 PF4P02776 101 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST1H2BJP06899 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 SMIM13P0DJ93 91 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 LYNX1P0DP58 116 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST1H2BOP23527 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 CEACAM8P31997 349 aaPredicted RBP5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST1H2BBP33778 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST1H2BDP58876 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST1H2BCP62807 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 COTL1Q14019 142 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST2H2BEQ16778 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 C5orf64Q2M2E5 130 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.24□□□□□ -1.57
CNOT1-202ENST00000441024 OR10W1Q8NGF6 305 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST1H2BHQ93079 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 SCGB3A1Q96QR1 104 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST1H2BNQ99877 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 HIST1H2BMQ99879 126 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 PRDM13Q9H4Q3 707 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 NRN1Q9NPD7 142 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 GSN-AS1Q9NRJ2 163 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 AHCTF1Q8WYP5 2266 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 TRBV7-1A0A0A6YYK4 115 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 SERF1AO75920 110 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 PAX8Q06710 450 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 KIF26BQ2KJY2 2108 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 BEND2Q8NDZ0 799 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 SMIM12Q96EX1 92 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 DMRTA2Q96SC8 542 aa5.24□□□□□ -1.57
CNOT1-202ENST00000441024 PEF1Q9UBV8 284 aaKnown RBP5.24□□□□□ -1.57
CNOT1-202ENST00000441024 IGHV3OR16-13A0A075B7E8 117 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 IGHV3-74A0A0B4J1X5 117 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 SELLP14151 372 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 RNASE4P34096 147 aaKnown RBP5.23□□□□□ -1.57
CNOT1-202ENST00000441024 CFHR2P36980 270 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 UQCRFS1P47985 274 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 ERVK11-1P61568 191 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 ZNF585BQ52M93 769 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 GCSAMLQ5JQS6 135 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 TMEM101Q96IK0 257 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 BRWD1Q9NSI6 2320 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 FREM3P0C091 2139 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 TRGV11A0A075B6L2 103 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 IGHV3-66A0A0C4DH42 116 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 M0R381 172 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 RNASE2P10153 161 aaKnown RBP5.23□□□□□ -1.57
CNOT1-202ENST00000441024 FAM74A4Q5TZK3 123 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 DTX1Q86Y01 620 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 DUX3Q96PT4 197 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 SLC25A39Q9BZJ4 359 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-202ENST00000441024 SIGLEC9Q9Y336 463 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 IGHV3OR16-12A0A075B7B8 117 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-202ENST00000441024 H3BRM9 83 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-202ENST00000441024 K7ENP7 123 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 LINC01551Q86U37 167 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 TTC9CQ8N5M4 171 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 NUDT10Q8NFP7 164 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 NUDT11Q96G61 164 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 USMG5Q96IX5 58 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 C2orf88Q9BSF0 95 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 CFAP54Q96N23 3096 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 IGHV3-49A0A0A0MS15 119 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 TRAV3A0A0B4J244 114 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 FAM223BA6NKX1 122 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 NDUFS8O00217 210 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 NDUFS6O75380 124 aaKnown RBP5.23□□□□□ -1.57
CNOT1-202ENST00000441024 TOMM40O96008 361 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 IGLV1-44P01699 117 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 PSG1P11464 419 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 PRTN3P24158 256 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 NTF4P34130 210 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 SRSF1Q07955 248 aaKnown RBP eCLIP5.23□□□□□ -1.57
CNOT1-202ENST00000441024 ORMDL2Q53FV1 153 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 SIGLEC15Q6ZMC9 328 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 FAM223AQ8IWN6 122 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 LINC00311Q8N616 119 aa5.23□□□□□ -1.57
CNOT1-202ENST00000441024 IGKV1-6A0A0C4DH72 117 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 B4DSR2 109 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 H3BVH4 76 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 HBDP02042 147 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 LINC00614P0C842 121 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 SMPXQ9UHP9 88 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 ZNF256Q9Y2P7 627 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-202ENST00000441024 EML5Q05BV3 1969 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 TCRAP04437 139 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 SLC25A16P16260 332 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 C9orf139Q6ZV77 190 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 ST20Q9HBF5 79 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 TMEM160Q9NX00 188 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 RP1L1Q8IWN7 2480 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-202ENST00000441024 TRIOBPQ9H2D6 2365 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 TRAV5A0A0B4J249 113 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms