RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 SMIM8Q96KF7 97 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 VSIRQ9H7M9 311 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 SRD5A3Q9H8P0 318 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 EDA2RQ9HAV5 297 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 GPN1Q9HCN4 374 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-204ENST00000430982 PCLOQ9Y6V0 5065 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 ALMS1Q8TCU4 4167 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 A0A1W2PS18 150 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 OR4C46A6NHA9 309 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 MBPP02686 304 aaPredicted RBP11.35□□□□□ -0.59
PTCD1-204ENST00000430982 RPL11P62913 178 aaKnown RBP11.35□□□□□ -0.59
PTCD1-204ENST00000430982 ZFAND6Q6FIF0 208 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 OR8G2PQ6IF36 304 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 GSG1LQ6UXU4 331 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 LILRB2Q8N423 598 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 GBGT1Q8N5D6 347 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 C2orf50Q96LR7 162 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 RAB40CQ96S21 281 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 UBQLN2Q9UHD9 624 aa11.35□□□□□ -0.59
PTCD1-204ENST00000430982 RCL1Q9Y2P8 373 aaKnown RBP11.35□□□□□ -0.59
PTCD1-204ENST00000430982 LSM5Q9Y4Y9 91 aaKnown RBP11.35□□□□□ -0.59
PTCD1-204ENST00000430982 IGKV1D-37A0A075B6S9 117 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 L7N2F9 121 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 DFFBO76075 338 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 HNRNPCP07910 306 aaKnown RBP eCLIP11.34□□□□□ -0.596e-6■■■■□ 19.3
PTCD1-204ENST00000430982 PSG1P11464 419 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 CRYBB3P26998 211 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 PAX9P55771 341 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 VAMP2P63027 116 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 OR2F1Q13607 317 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 FAM90A2PQ658T7 463 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 ACOT7LQ6ZUV0 252 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 WFDC3Q8IUB2 231 aa11.34□□□□□ -0.59
PTCD1-204ENST00000430982 SMCO3A2RU48 225 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 PRSS46E5RG02 174 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 PRAF2O60831 178 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 CD5P06127 495 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 FABP1P07148 127 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 METTL15P1P0C7V9 234 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 P2RY1P47900 373 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 ZNF90Q03938 601 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 AKR1C1Q04828 323 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 USF2Q15853 346 aaPredicted RBP11.33□□□□□ -0.6
PTCD1-204ENST00000430982 HAGHQ16775 308 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 OR51G1Q8NGK1 321 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 GRAMD2BQ96HH9 432 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 TRGV9Q99603 122 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 PBDC1Q9BVG4 233 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 ZMAT4Q9H898 229 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 RABAC1Q9UI14 185 aa11.33□□□□□ -0.6
PTCD1-204ENST00000430982 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 RBMY1BA6NDE4 496 aaKnown RBP11.32□□□□□ -0.6
PTCD1-204ENST00000430982 RBMY1EA6NEQ0 496 aaKnown RBP11.32□□□□□ -0.6
PTCD1-204ENST00000430982 SNRPGP15A8MWD9 76 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 K7EPK0 472 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 DNASE2O00115 360 aaPredicted RBP11.32□□□□□ -0.6
PTCD1-204ENST00000430982 TSC22D2O75157 780 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 CCNKO75909 580 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 RBMY1DP0C7P1 496 aaKnown RBP11.32□□□□□ -0.6
PTCD1-204ENST00000430982 TAS2R30P59541 319 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 S100A10P60903 97 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 TMEM14EPQ6UXP3 125 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 THAP8Q8NA92 274 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 RNF125Q96EQ8 232 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 TM2D3Q9BRN9 247 aa11.32□□□□□ -0.6
PTCD1-204ENST00000430982 C7orf66A4D0T2 115 aa11.31□□□□□ -0.6
PTCD1-204ENST00000430982 GOSR2O14653 212 aa11.31□□□□□ -0.6
PTCD1-204ENST00000430982 BCAP31P51572 246 aa11.31□□□□□ -0.6
PTCD1-204ENST00000430982 LYZP61626 148 aa11.31□□□□□ -0.6
PTCD1-204ENST00000430982 RRAS2P62070 204 aaPredicted RBP11.31□□□□□ -0.6
PTCD1-204ENST00000430982 ODF3L2Q3SX64 289 aa11.31□□□□□ -0.6
PTCD1-204ENST00000430982 MARVELD1Q9BSK0 173 aa11.31□□□□□ -0.6
PTCD1-204ENST00000430982 MS4A6AQ9H2W1 248 aa11.31□□□□□ -0.6
PTCD1-204ENST00000430982 U3KQE9 123 aa11.31□□□□□ -0.6
PTCD1-204ENST00000430982 IGKV1OR2-108A0A075B7D4 117 aa11.3□□□□□ -0.6
PTCD1-204ENST00000430982 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
PTCD1-204ENST00000430982 SIX6O95475 246 aa11.3□□□□□ -0.6
PTCD1-204ENST00000430982 LINC00322Q6ZN03 302 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-204ENST00000430982 STXBP6Q8NFX7 210 aa11.3□□□□□ -0.6
PTCD1-204ENST00000430982 OR10P1Q8NGE3 313 aa11.3□□□□□ -0.6
PTCD1-204ENST00000430982 LOC102724200A0A096LPH7 203 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-204ENST00000430982 PVALBP20472 110 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-204ENST00000430982 EIF2B2P49770 351 aaKnown RBP11.29□□□□□ -0.6
PTCD1-204ENST00000430982 CAV2P51636 162 aa11.29□□□□□ -0.6
PTCD1-204ENST00000430982 CMC4P56277 68 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-204ENST00000430982 DLK1P80370 383 aa11.29□□□□□ -0.6
PTCD1-204ENST00000430982 RAB32Q13637 225 aa11.29□□□□□ -0.6
PTCD1-204ENST00000430982 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
PTCD1-204ENST00000430982 TMEM144Q7Z5S9 345 aa11.29□□□□□ -0.6
PTCD1-204ENST00000430982 PPP1R14BQ96C90 147 aa11.29□□□□□ -0.6
PTCD1-204ENST00000430982 SPATA25Q9BR10 227 aa11.29□□□□□ -0.6
PTCD1-204ENST00000430982 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
PTCD1-204ENST00000430982 MGAT4CQ9UBM8 478 aa11.29□□□□□ -0.6
PTCD1-204ENST00000430982 HELTA6NFD8 242 aa11.28□□□□□ -0.6
PTCD1-204ENST00000430982 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
PTCD1-204ENST00000430982 SSNA1O43805 119 aa11.28□□□□□ -0.6
PTCD1-204ENST00000430982 ARL16Q0P5N6 197 aa11.28□□□□□ -0.6
PTCD1-204ENST00000430982 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
PTCD1-204ENST00000430982 BPIFCQ8NFQ6 507 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms