RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 A0A0B4J2A0 478 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 PIGBOS1A0A0B4J2F0 54 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 CTDSP2O14595 271 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 NXPH3O95157 252 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 PSG1P11464 419 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 NKX2-1P43699 371 aaPredicted RBP10.73□□□□□ -0.69
MSH5-208ENST00000429846 CCR6P51684 374 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 ATP5IP56385 69 aaPredicted RBP10.73□□□□□ -0.69
MSH5-208ENST00000429846 IL18Q14116 193 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 LINC00336Q6ZUF6 198 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 OR51S1Q8NGJ8 323 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 DTD1Q8TEA8 209 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 NEU1Q99519 415 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 HSPB7Q9UBY9 170 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 SHPKQ9UHJ6 478 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 SCP2D1Q9UJQ7 156 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 CELA1Q9UNI1 258 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 HECTD4Q9Y4D8 3996 aa10.73□□□□□ -0.69
MSH5-208ENST00000429846 SRPXP78539 464 aa10.72□□□□□ -0.69
MSH5-208ENST00000429846 SMCO1Q147U7 214 aa10.72□□□□□ -0.69
MSH5-208ENST00000429846 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
MSH5-208ENST00000429846 ZNF705AQ6ZN79 300 aaPredicted RBP10.72□□□□□ -0.69
MSH5-208ENST00000429846 GPR141Q7Z602 305 aa10.72□□□□□ -0.69
MSH5-208ENST00000429846 CLVS1Q8IUQ0 354 aaPredicted RBP10.72□□□□□ -0.69
MSH5-208ENST00000429846 LGI3Q8N145 548 aa10.72□□□□□ -0.69
MSH5-208ENST00000429846 DIRAS2Q96HU8 199 aa10.72□□□□□ -0.69
MSH5-208ENST00000429846 MRPS26Q9BYN8 205 aaKnown RBP10.72□□□□□ -0.69
MSH5-208ENST00000429846 XCL2Q9UBD3 114 aa10.72□□□□□ -0.69
MSH5-208ENST00000429846 ANKRD20A5PA0PJZ0 165 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 TMEM189A5PLL7 270 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 SMIM9A6NGZ8 99 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 FABP1P07148 127 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 P0DMU3 169 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 FAM231AP0DMU4 169 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 FAM231CP0DMU5 169 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 ANXA3P12429 323 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 KLF9Q13886 244 aaPredicted RBP10.71□□□□□ -0.69
MSH5-208ENST00000429846 NDUFAF3Q9BU61 184 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 KRTAP17-1Q9BYP8 105 aa10.71□□□□□ -0.69
MSH5-208ENST00000429846 CCDC59Q9P031 241 aaKnown RBP10.71□□□□□ -0.69
MSH5-208ENST00000429846 DNAH10Q8IVF4 4471 aa10.71□□□□□ -0.7
MSH5-208ENST00000429846 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 ZFP92A6NM28 416 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 ZNF705FA8MVS1 300 aaPredicted RBP10.7□□□□□ -0.7
MSH5-208ENST00000429846 ZNF705DP0CH99 300 aaPredicted RBP10.7□□□□□ -0.7
MSH5-208ENST00000429846 ZNF705BP0CI00 300 aaPredicted RBP10.7□□□□□ -0.7
MSH5-208ENST00000429846 GPX4P36969 197 aaPredicted RBP10.7□□□□□ -0.7
MSH5-208ENST00000429846 ID1P41134 155 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 PSMB3P49720 205 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 SPCS2Q15005 226 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 C1orf194Q5T5A4 169 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 FOXI2Q6ZQN5 318 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 SLC35E1Q96K37 410 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 CLUHP3Q96NS8 147 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 PBDC1Q9BVG4 233 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 RSL24D1Q9UHA3 163 aaKnown RBP10.7□□□□□ -0.7
MSH5-208ENST00000429846 HERC2O95714 4834 aa10.7□□□□□ -0.7
MSH5-208ENST00000429846 DNAH6Q9C0G6 4158 aa10.69□□□□□ -0.7
MSH5-208ENST00000429846 SPART-AS1P0CW21 52 aa10.69□□□□□ -0.7
MSH5-208ENST00000429846 ALDH3B2P48448 385 aa10.69□□□□□ -0.7
MSH5-208ENST00000429846 SUPT4H1P63272 117 aaKnown RBP10.69□□□□□ -0.7
MSH5-208ENST00000429846 SAMD13Q5VXD3 122 aa10.69□□□□□ -0.7
MSH5-208ENST00000429846 SPATA31B1PQ5VZV4 182 aa10.69□□□□□ -0.7
MSH5-208ENST00000429846 POM121L12Q8N7R1 296 aa10.69□□□□□ -0.7
MSH5-208ENST00000429846 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
MSH5-208ENST00000429846 BCL7BQ9BQE9 202 aa10.69□□□□□ -0.7
MSH5-208ENST00000429846 RBKSQ9H477 322 aa10.69□□□□□ -0.7
MSH5-208ENST00000429846 SAV1Q9H4B6 383 aaPredicted RBP10.69□□□□□ -0.7
MSH5-208ENST00000429846 VPS13DQ5THJ4 4388 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 DUXBA0A1W2PPF3 345 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 AKR1C4P17516 323 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 GAMTQ14353 236 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 ZNF767PQ75MW2 155 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 LYZL2Q7Z4W2 148 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 OR1S1Q8NH92 325 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 COQ8AQ8NI60 647 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 FAM210BQ96KR6 192 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 MCUBQ9NWR8 336 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 PRR13Q9NZ81 148 aa10.68□□□□□ -0.7
MSH5-208ENST00000429846 IGKV1D-37A0A075B6S9 117 aa10.67□□□□□ -0.7
MSH5-208ENST00000429846 SOCS3O14543 225 aa10.67□□□□□ -0.7
MSH5-208ENST00000429846 LYZP61626 148 aa10.67□□□□□ -0.7
MSH5-208ENST00000429846 GDF5OSQ5U4N7 250 aa10.67□□□□□ -0.7
MSH5-208ENST00000429846 DYNC2LI1Q8TCX1 351 aa10.67□□□□□ -0.7
MSH5-208ENST00000429846 WDR12Q9GZL7 423 aaKnown RBP10.67□□□□□ -0.7
MSH5-208ENST00000429846 RFNGQ9Y644 331 aa10.67□□□□□ -0.7
MSH5-208ENST00000429846 SNRPGP15A8MWD9 76 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 ISLRO14498 428 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 CFDP00746 253 aaPredicted RBP10.66□□□□□ -0.7
MSH5-208ENST00000429846 FAUP35544 74 aaKnown RBP10.66□□□□□ -0.7
MSH5-208ENST00000429846 MEOX2P50222 304 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 TMBIM6P55061 237 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 PAX9P55771 341 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 RAB11AP62491 216 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 ZNF90Q03938 601 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 ZNF709Q8N972 641 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 LINC00052Q96N35 136 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 TRGV9Q99603 122 aa10.66□□□□□ -0.7
MSH5-208ENST00000429846 PITX3O75364 302 aa10.65□□□□□ -0.7
MSH5-208ENST00000429846 SLC25A6P12236 298 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms