RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SPRY4Q9C004 299 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 IL36BQ9NZH7 164 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.6□□□□□ -1.353e-7■■■■□ 19.5
HPS4-205ENST00000429411 SETD2Q9BYW2 2564 aaPredicted RBP6.6□□□□□ -1.35
HPS4-205ENST00000429411 NDUFB3O43676 98 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 KIR2DS2P43631 304 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 FOXA3P55318 350 aaPredicted RBP6.6□□□□□ -1.35
HPS4-205ENST00000429411 TDRG1Q3Y452 100 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 Q56UQ5 140 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 IDI2-AS1Q9NZ38 188 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 S4R3C0 116 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 PRRG2O14669 202 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 UQCRFS1P47985 274 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 HES1Q14469 280 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 C10orf113Q5VZT2 155 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 FAM222BQ8WU58 562 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 DYSFO75923 2080 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 RBP4P02753 201 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 GLRXP35754 106 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 RPL8P62917 257 aaKnown RBP6.59□□□□□ -1.35
HPS4-205ENST00000429411 HIST2H2BCQ6DN03 193 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 ZNF474Q6S9Z5 364 aaPredicted RBP6.59□□□□□ -1.35
HPS4-205ENST00000429411 Q6ZN92 141 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 PAXXQ9BUH6 204 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 PPIAL4AQ9Y536 164 aa6.59□□□□□ -1.35
HPS4-205ENST00000429411 LYZP61626 148 aa6.59□□□□□ -1.36
HPS4-205ENST00000429411 C1orf229Q6ZS94 237 aaPredicted RBP6.59□□□□□ -1.36
HPS4-205ENST00000429411 TMEM106BQ9NUM4 274 aa6.59□□□□□ -1.36
HPS4-205ENST00000429411 AMMECR1Q9Y4X0 333 aaPredicted RBP6.59□□□□□ -1.36
HPS4-205ENST00000429411 TRAV26-1A0A087WT03 109 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 LYNX1G3V0Z9 82 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 APCSP02743 223 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 C8orf88P0DMB2 117 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 LYNX1P0DP58 116 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 APOBEC3AP31941 199 aaPredicted RBP6.58□□□□□ -1.36
HPS4-205ENST00000429411 BRS3P32247 399 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 VDAC2P45880 294 aaPredicted RBP6.58□□□□□ -1.36
HPS4-205ENST00000429411 HNRNPA3P51991 378 aaKnown RBP6.58□□□□□ -1.36
HPS4-205ENST00000429411 SUB1P53999 127 aaKnown RBP eCLIP6.58□□□□□ -1.36
HPS4-205ENST00000429411 OR1L8Q8NGR8 309 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 ADTRPQ96IZ2 230 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 POLR3KQ9Y2Y1 108 aaPredicted RBP6.58□□□□□ -1.36
HPS4-205ENST00000429411 SLC25A15Q9Y619 301 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 ARL2-SNX15V9GYD0 113 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 PGPA6NDG6 321 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 SRRM4A7MD48 611 aaKnown RBP6.58□□□□□ -1.36
HPS4-205ENST00000429411 K7EN84 100 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 IGHV1-46P01743 117 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 TDGF1P3P51864 188 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 DIAPH2-AS1Q14236 149 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 TMEM249Q2WGJ8 235 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 GFRALQ6UXV0 394 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 ZNF714Q96N38 554 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 GNB4Q9HAV0 340 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 DSCAMO60469 2012 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 ITPR2Q14571 2701 aa6.58□□□□□ -1.36
HPS4-205ENST00000429411 TEX50A0A1B0GTY4 177 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 M0R2Z0 102 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 SIAH2O43255 324 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 TNFSF13O75888 250 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 CD24P25063 80 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 COL8A1P27658 744 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 LGALS4P56470 323 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 LRRC10Q5BKY1 277 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 LCN12Q6JVE5 192 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 SNHG12Q9BXW3 62 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 DNAJC4Q9NNZ3 241 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 TNFRSF18Q9Y5U5 241 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 F8WDY8 70 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 GNLYP22749 145 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 LOXL3P58215 753 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 SPATA45Q537H7 98 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 TIMM23BQ5SRD1 257 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 PDPNQ86YL7 162 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 TSSC4Q9Y5U2 329 aaPredicted RBP6.57□□□□□ -1.36
HPS4-205ENST00000429411 PPIAL4EA0A075B759 164 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 TMSB15BA0A087X1C1 80 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 PPIAL4DF5H284 164 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 RPLP1P05386 114 aaKnown RBP6.57□□□□□ -1.36
HPS4-205ENST00000429411 PPIAL4FP0DN26 164 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 CD40P25942 277 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 PMCHL1Q16048 86 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 C17orf58Q2M2W7 97 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 TMEM144Q7Z5S9 345 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 ARHGAP32A7KAX9 2087 aa6.57□□□□□ -1.36
HPS4-205ENST00000429411 UPK2O00526 184 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 CHEK1O14757 476 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 HINT1P49773 126 aaPredicted RBP6.56□□□□□ -1.36
HPS4-205ENST00000429411 FOXL1Q12952 345 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 VMA21Q3ZAQ7 101 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 MORN5Q5VZ52 161 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 LINC00305Q7Z4B0 112 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 PYGO2Q9BRQ0 406 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 NOTCH3Q9UM47 2321 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 PCSK5Q92824 1860 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 TRBV7-9A0A0J9YWB2 115 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 C16orf97H3BN30 126 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 M0QZ24 198 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 CT45A6P0DMU7 189 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 CT45A5P0DMU8 189 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms