RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 ANK1P16157 1881 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 TMEM178BH3BS89 294 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 IFI27P40305 119 aaPredicted RBP10.84□□□□□ -0.67
SPG11-202ENST00000427534 CD300EQ496F6 205 aaPredicted RBP10.84□□□□□ -0.67
SPG11-202ENST00000427534 ZNF625Q96I27 306 aaPredicted RBP10.84□□□□□ -0.67
SPG11-202ENST00000427534 C15orf61A6NNL5 157 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 IGHV1-8P0DP01 117 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 RALGAPA2Q2PPJ7 1873 aa10.83□□□□□ -0.67
SPG11-202ENST00000427534 K7ERU9 68 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 CGB7P0DN87 165 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 LINC01356Q8N9X3 169 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 LBHQ53QV2 105 aaPredicted RBP10.83□□□□□ -0.68
SPG11-202ENST00000427534 PARD6GQ9BYG4 376 aaPredicted RBP10.83□□□□□ -0.68
SPG11-202ENST00000427534 XCL2Q9UBD3 114 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 SRRM4A7MD48 611 aaKnown RBP10.83□□□□□ -0.68
SPG11-202ENST00000427534 CCL1P22362 96 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 SAA4P35542 130 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 FOXL1Q12952 345 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 SPAG8Q99932 426 aaPredicted RBP10.83□□□□□ -0.68
SPG11-202ENST00000427534 LTBP1Q14766 1721 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.83□□□□□ -0.68
SPG11-202ENST00000427534 BTCP35070 178 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 TPTE2P1Q5T6R2 138 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 MSRB2Q9Y3D2 182 aa10.83□□□□□ -0.68
SPG11-202ENST00000427534 TCRAP04437 139 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 TTC9CQ8N5M4 171 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 COQ2Q96H96 371 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 ZDBF2Q9HCK1 2354 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 MYO7BQ6PIF6 2116 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 INS-IGF2F8WCM5 200 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 SLC25A20O43772 301 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 INSP01308 110 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 GPX4P36969 197 aaPredicted RBP10.82□□□□□ -0.68
SPG11-202ENST00000427534 MLANAQ16655 118 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 SAMD13Q5VXD3 122 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 CIARTQ8N365 385 aaPredicted RBP10.82□□□□□ -0.68
SPG11-202ENST00000427534 FBLN5Q9UBX5 448 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 SRSF3P84103 164 aaKnown RBP10.82□□□□□ -0.68
SPG11-202ENST00000427534 C10orf126Q8N4M7 172 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 RNF182Q8N6D2 247 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 PRADC1Q9BSG0 188 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 ZNF257Q9Y2Q1 563 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 MPDZO75970 2070 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 FABP5P3A8MUU1 101 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 F5H768 121 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 ADMP35318 185 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 PAX2Q02962 417 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 IL36BQ9NZH7 164 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 CLPSL2Q6UWE3 100 aa10.82□□□□□ -0.68
SPG11-202ENST00000427534 RNF222A6NCQ9 220 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 COPS9Q8WXC6 57 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 GGACTQ9BVM4 153 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 PSG8Q9UQ74 426 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 TRPM7Q96QT4 1865 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 PSPNO60542 156 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 TRBV6-7A0A0A0MS04 114 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 DPRXA6NFQ7 191 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 E7EQL1 145 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 NRGNQ92686 78 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 KLK9Q9UKQ9 250 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.81□□□□□ -0.68
SPG11-202ENST00000427534 IL18BPO95998 194 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 OTORQ9NRC9 128 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 J3QKU1 62 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 YPEL1O60688 119 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 HOXD3P31249 432 aaPredicted RBP10.81□□□□□ -0.68
SPG11-202ENST00000427534 YPEL2Q96QA6 119 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 CACNA1EQ15878 2313 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 COL6A6A6NMZ7 2263 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 PET117Q6UWS5 81 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 ZNF600Q6ZNG1 722 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 DMRT1Q9Y5R6 373 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 AKAP6Q13023 2319 aa10.81□□□□□ -0.68
SPG11-202ENST00000427534 SMKR1H3BMG3 65 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 IGKV1-27A0A075B6S5 117 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 IGKV1-12A0A0C4DH73 117 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 IGKV1D-12P01611 117 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 ZNF876PQ49A33 203 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 MED12Q93074 2177 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 CLPSP04118 112 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 DOCK8Q8NF50 2099 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 A0A0G2JMZ2 1700 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 LRRC37A2A6NM11 1700 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 LCTP09848 1927 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 PAPPA-AS1Q5QFB9 102 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 GFI1Q99684 422 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 DKK1O94907 266 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 PSG1P11464 419 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 COTL1Q14019 142 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 ORMDL3Q8N138 153 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 C1orf159Q96HA4 380 aa10.8□□□□□ -0.68
SPG11-202ENST00000427534 MCRIP2Q9BUT9 160 aaKnown RBP10.79□□□□□ -0.68
SPG11-202ENST00000427534 GAS1P54826 345 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 DUX4L9Q6RFH8 374 aaPredicted RBP10.79□□□□□ -0.68
SPG11-202ENST00000427534 NAA38Q9BRA0 125 aaKnown RBP10.79□□□□□ -0.68
SPG11-202ENST00000427534 UQCR10Q9UDW1 63 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 SLC25A15Q9Y619 301 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms