RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ZNF90Q03938 601 aa13.45□□□□□ -0.26
NUP50-207ENST00000424634 PPP1R1AQ13522 171 aa13.45□□□□□ -0.26
NUP50-207ENST00000424634 PHLDA1Q8WV24 401 aaPredicted RBP13.45□□□□□ -0.26
NUP50-207ENST00000424634 IAPPP10997 89 aa13.44□□□□□ -0.26
NUP50-207ENST00000424634 AP2S1P53680 142 aaPredicted RBP13.44□□□□□ -0.26
NUP50-207ENST00000424634 NANOS2P60321 138 aaKnown RBP13.44□□□□□ -0.26
NUP50-207ENST00000424634 ACTL10Q5JWF8 245 aa13.44□□□□□ -0.26
NUP50-207ENST00000424634 DEDD2Q8WXF8 326 aa13.44□□□□□ -0.26
NUP50-207ENST00000424634 RAB40CQ96S21 281 aa13.44□□□□□ -0.26
NUP50-207ENST00000424634 SRRQ9GZT4 340 aa13.44□□□□□ -0.26
NUP50-207ENST00000424634 C11orf68Q9H3H3 251 aaKnown RBP13.44□□□□□ -0.26
NUP50-207ENST00000424634 FAM90A26D6RGX4 464 aa13.43□□□□□ -0.26
NUP50-207ENST00000424634 LY6G6CO95867 125 aa13.43□□□□□ -0.26
NUP50-207ENST00000424634 SLC25A6P12236 298 aa13.43□□□□□ -0.26
NUP50-207ENST00000424634 C4BPBP20851 252 aa13.43□□□□□ -0.26
NUP50-207ENST00000424634 EIF2B2P49770 351 aaKnown RBP13.43□□□□□ -0.26
NUP50-207ENST00000424634 PSMG4Q5JS54 123 aa13.43□□□□□ -0.26
NUP50-207ENST00000424634 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
NUP50-207ENST00000424634 PIGBOS1A0A0B4J2F0 54 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 ZFP92A6NM28 416 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 ZNF701M0R085 212 aaPredicted RBP13.42□□□□□ -0.26
NUP50-207ENST00000424634 HOXB5P09067 269 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 BAK1Q16611 211 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 SIGLEC15Q6ZMC9 328 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 CENPSQ8N2Z9 138 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 C11orf45Q8TAV5 145 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 MAGT1Q9H0U3 335 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 NRN1Q9NPD7 142 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 KLK5Q9Y337 293 aaPredicted RBP13.42□□□□□ -0.26
NUP50-207ENST00000424634 TMED3Q9Y3Q3 217 aa13.42□□□□□ -0.26
NUP50-207ENST00000424634 VPS13DQ5THJ4 4388 aa13.41□□□□□ -0.26
NUP50-207ENST00000424634 IGKV1OR2-108A0A075B7D4 117 aa13.41□□□□□ -0.26
NUP50-207ENST00000424634 SPP1P10451 314 aa13.41□□□□□ -0.26
NUP50-207ENST00000424634 SPANXN2Q5MJ10 180 aa13.41□□□□□ -0.26
NUP50-207ENST00000424634 MORN3Q6PF18 240 aaPredicted RBP13.41□□□□□ -0.26
NUP50-207ENST00000424634 Q8NAQ8 132 aa13.41□□□□□ -0.26
NUP50-207ENST00000424634 CSNK1G2-AS1Q8NCQ2 148 aa13.41□□□□□ -0.26
NUP50-207ENST00000424634 SLC35E1Q96K37 410 aa13.41□□□□□ -0.26
NUP50-207ENST00000424634 PBDC1Q9BVG4 233 aa13.41□□□□□ -0.26
NUP50-207ENST00000424634 RBMY1A1P0DJD3 496 aaKnown RBP13.4□□□□□ -0.26
NUP50-207ENST00000424634 RBMY1CP0DJD4 496 aa13.4□□□□□ -0.26
NUP50-207ENST00000424634 RBMY1FQ15415 496 aaKnown RBP13.4□□□□□ -0.26
NUP50-207ENST00000424634 GGNBP1Q5YKI7 109 aa13.4□□□□□ -0.26
NUP50-207ENST00000424634 SDHCQ99643 169 aaPredicted RBP13.4□□□□□ -0.26
NUP50-207ENST00000424634 SEPSECSQ9HD40 501 aaKnown RBP13.4□□□□□ -0.26
NUP50-207ENST00000424634 CLEC5AQ9NY25 188 aa13.4□□□□□ -0.26
NUP50-207ENST00000424634 FBXL17Q9UF56 701 aa13.4□□□□□ -0.26
NUP50-207ENST00000424634 FRAS1Q86XX4 4008 aa13.4□□□□□ -0.26
NUP50-207ENST00000424634 ZNF705EA8MWA4 302 aaPredicted RBP13.39□□□□□ -0.27
NUP50-207ENST00000424634 PRSS46E5RG02 174 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 WRBO00258 174 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 SYNGR2O43760 224 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 MED6O75586 246 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 RAB11AP62491 216 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 OR2F1Q13607 317 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 TMEM41BQ5BJD5 291 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 OR8G2PQ6IF36 304 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 GSG1LQ6UXU4 331 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 THAP8Q8NA92 274 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 TRGV9Q99603 122 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 WDR12Q9GZL7 423 aaKnown RBP13.39□□□□□ -0.27
NUP50-207ENST00000424634 PAIP2BQ9ULR5 123 aaKnown RBP13.39□□□□□ -0.27
NUP50-207ENST00000424634 FLVCR2Q9UPI3 526 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 X6R8D5 127 aa13.39□□□□□ -0.27
NUP50-207ENST00000424634 IGHV4-28A0A0C4DH34 117 aa13.38□□□□□ -0.27
NUP50-207ENST00000424634 C9orf170A2RU37 121 aa13.38□□□□□ -0.27
NUP50-207ENST00000424634 ADAP1O75689 374 aa13.38□□□□□ -0.27
NUP50-207ENST00000424634 LYZP61626 148 aa13.38□□□□□ -0.27
NUP50-207ENST00000424634 SNRPD3P62318 126 aaKnown RBP13.38□□□□□ -0.27
NUP50-207ENST00000424634 MFFQ9GZY8 342 aa13.38□□□□□ -0.27
NUP50-207ENST00000424634 SNRPGP15A8MWD9 76 aa13.37□□□□□ -0.27
NUP50-207ENST00000424634 H3BMM0 161 aa13.37□□□□□ -0.27
NUP50-207ENST00000424634 NDUFB6O95139 128 aa13.37□□□□□ -0.27
NUP50-207ENST00000424634 DEFB1P60022 68 aa13.37□□□□□ -0.27
NUP50-207ENST00000424634 UBE2MP61081 183 aaKnown RBP13.37□□□□□ -0.27
NUP50-207ENST00000424634 CIB3Q96Q77 187 aaPredicted RBP13.37□□□□□ -0.27
NUP50-207ENST00000424634 DNAH10Q8IVF4 4471 aa13.37□□□□□ -0.27
NUP50-207ENST00000424634 LINC00854A0A1B0GVQ3 168 aa13.36□□□□□ -0.27
NUP50-207ENST00000424634 NAP1L6A6NFF2 107 aa13.36□□□□□ -0.27
NUP50-207ENST00000424634 BTCP35070 178 aa13.36□□□□□ -0.27
NUP50-207ENST00000424634 ID3Q02535 119 aa13.36□□□□□ -0.27
NUP50-207ENST00000424634 SPANXN5Q5MJ07 72 aa13.36□□□□□ -0.27
NUP50-207ENST00000424634 GDF5OSQ5U4N7 250 aa13.36□□□□□ -0.27
NUP50-207ENST00000424634 TMEM182Q6ZP80 229 aaPredicted RBP13.36□□□□□ -0.27
NUP50-207ENST00000424634 ELOA3CA0A087WX78 387 aaPredicted RBP13.35□□□□□ -0.27
NUP50-207ENST00000424634 H3BP45 60 aa13.35□□□□□ -0.27
NUP50-207ENST00000424634 SOCS3O14543 225 aa13.35□□□□□ -0.27
NUP50-207ENST00000424634 FABP1P07148 127 aa13.35□□□□□ -0.27
NUP50-207ENST00000424634 MIFP14174 115 aa13.35□□□□□ -0.27
NUP50-207ENST00000424634 NUP62P37198 522 aaPredicted RBP13.35□□□□□ -0.27
NUP50-207ENST00000424634 NKX2-1P43699 371 aaPredicted RBP13.35□□□□□ -0.27
NUP50-207ENST00000424634 C1orf194Q5T5A4 169 aa13.35□□□□□ -0.27
NUP50-207ENST00000424634 TRIQKQ629K1 86 aa13.35□□□□□ -0.27
NUP50-207ENST00000424634 PFDN2Q9UHV9 154 aa13.35□□□□□ -0.27
NUP50-207ENST00000424634 TBC1D24Q9ULP9 559 aa13.35□□□□□ -0.27
NUP50-207ENST00000424634 HLA-DRB4P13762 266 aa13.34□□□□□ -0.27
NUP50-207ENST00000424634 GATA2P23769 480 aaPredicted RBP13.34□□□□□ -0.27
NUP50-207ENST00000424634 INPP1P49441 399 aa13.34□□□□□ -0.27
NUP50-207ENST00000424634 POLR2GP62487 172 aaKnown RBP eCLIP13.34□□□□□ -0.27
NUP50-207ENST00000424634 RPP30P78346 268 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms