RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 DCANP1Q8TF63 244 aa19.34■□□□□ 0.69
VEGFA-207ENST00000413642 STARD9Q9P2P6 4700 aa19.34■□□□□ 0.69
VEGFA-207ENST00000413642 TENM2Q9NT68 2774 aa19.33■□□□□ 0.69
VEGFA-207ENST00000413642 DYNC2H1Q8NCM8 4307 aaKnown RBP19.33■□□□□ 0.69
VEGFA-207ENST00000413642 ZNF688P0C7X2 276 aa19.33■□□□□ 0.68
VEGFA-207ENST00000413642 C7orf50Q9BRJ6 194 aaKnown RBP19.33■□□□□ 0.68
VEGFA-207ENST00000413642 RAB11AP62491 216 aa19.32■□□□□ 0.68
VEGFA-207ENST00000413642 OR2F1Q13607 317 aa19.32■□□□□ 0.68
VEGFA-207ENST00000413642 C4orf46Q504U0 113 aa19.32■□□□□ 0.68
VEGFA-207ENST00000413642 COQ8AQ8NI60 647 aa19.32■□□□□ 0.68
VEGFA-207ENST00000413642 IL17DQ8TAD2 202 aa19.32■□□□□ 0.68
VEGFA-207ENST00000413642 PBDC1Q9BVG4 233 aa19.32■□□□□ 0.68
VEGFA-207ENST00000413642 LCE6AA0A183 80 aa19.31■□□□□ 0.68
VEGFA-207ENST00000413642 KNCNA6PVL3 124 aa19.31■□□□□ 0.68
VEGFA-207ENST00000413642 H3BP45 60 aa19.31■□□□□ 0.68
VEGFA-207ENST00000413642 BUB3O43684 328 aa19.31■□□□□ 0.68
VEGFA-207ENST00000413642 POLR2GP62487 172 aaKnown RBP eCLIP19.31■□□□□ 0.68
VEGFA-207ENST00000413642 SPANXN5Q5MJ07 72 aa19.31■□□□□ 0.68
VEGFA-207ENST00000413642 RNF125Q96EQ8 232 aa19.31■□□□□ 0.68
VEGFA-207ENST00000413642 CIB3Q96Q77 187 aaPredicted RBP19.31■□□□□ 0.68
VEGFA-207ENST00000413642 IGKV1OR2-108A0A075B7D4 117 aa19.3■□□□□ 0.68
VEGFA-207ENST00000413642 HELTA6NFD8 242 aa19.3■□□□□ 0.68
VEGFA-207ENST00000413642 PRSS46E5RG02 174 aa19.3■□□□□ 0.68
VEGFA-207ENST00000413642 ID3Q02535 119 aa19.3■□□□□ 0.68
VEGFA-207ENST00000413642 RYR2Q92736 4967 aa19.3■□□□□ 0.68
VEGFA-207ENST00000413642 LYRM1O43325 122 aa19.28■□□□□ 0.68
VEGFA-207ENST00000413642 GSG1LQ6UXU4 331 aa19.28■□□□□ 0.68
VEGFA-207ENST00000413642 OR4D5Q8NGN0 318 aa19.28■□□□□ 0.68
VEGFA-207ENST00000413642 CA1P00915 261 aaPredicted RBP19.27■□□□□ 0.68
VEGFA-207ENST00000413642 IFNA21P01568 189 aa19.27■□□□□ 0.68
VEGFA-207ENST00000413642 EIF2B2P49770 351 aaKnown RBP19.27■□□□□ 0.68
VEGFA-207ENST00000413642 LYZP61626 148 aa19.27■□□□□ 0.68
VEGFA-207ENST00000413642 RPP30P78346 268 aaKnown RBP19.27■□□□□ 0.68
VEGFA-207ENST00000413642 TRGV9Q99603 122 aa19.27■□□□□ 0.68
VEGFA-207ENST00000413642 C20orf85Q9H1P6 137 aa19.27■□□□□ 0.68
VEGFA-207ENST00000413642 NKX2-1P43699 371 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-207ENST00000413642 PSMG4Q5JS54 123 aa19.26■□□□□ 0.67
VEGFA-207ENST00000413642 SIGLEC15Q6ZMC9 328 aa19.26■□□□□ 0.67
VEGFA-207ENST00000413642 TRPT1Q86TN4 253 aaKnown RBP19.26■□□□□ 0.67
VEGFA-207ENST00000413642 STHQ8IWL8 128 aa19.26■□□□□ 0.67
VEGFA-207ENST00000413642 THAP8Q8NA92 274 aa19.26■□□□□ 0.67
VEGFA-207ENST00000413642 STRAPQ9Y3F4 350 aaKnown RBP19.26■□□□□ 0.67
VEGFA-207ENST00000413642 SSSCA1O60232 199 aa19.25■□□□□ 0.67
VEGFA-207ENST00000413642 AP2S1P53680 142 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-207ENST00000413642 PMS2P11Q13670 270 aa19.25■□□□□ 0.67
VEGFA-207ENST00000413642 ACTL10Q5JWF8 245 aa19.25■□□□□ 0.67
VEGFA-207ENST00000413642 CSMD3Q7Z407 3707 aa19.25■□□□□ 0.67
VEGFA-207ENST00000413642 SNRPGP15A8MWD9 76 aa19.24■□□□□ 0.67
VEGFA-207ENST00000413642 GIG44P09565 113 aaPredicted RBP19.24■□□□□ 0.67
VEGFA-207ENST00000413642 OR8G2PQ6IF36 304 aa19.24■□□□□ 0.67
VEGFA-207ENST00000413642 TMEM182Q6ZP80 229 aaPredicted RBP19.24■□□□□ 0.67
VEGFA-207ENST00000413642 MITD1Q8WV92 249 aa19.24■□□□□ 0.67
VEGFA-207ENST00000413642 RARRES2Q99969 163 aa19.24■□□□□ 0.67
VEGFA-207ENST00000413642 NRN1Q9NPD7 142 aa19.24■□□□□ 0.67
VEGFA-207ENST00000413642 PSENENQ9NZ42 101 aa19.24■□□□□ 0.67
VEGFA-207ENST00000413642 TRAV6A0A075B6T7 132 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 CCNKO75909 580 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 SCGB1D2O95969 90 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 TCRBP04435 133 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 GATA2P23769 480 aaPredicted RBP19.23■□□□□ 0.67
VEGFA-207ENST00000413642 PAX9P55771 341 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 IAH1Q2TAA2 248 aaPredicted RBP19.23■□□□□ 0.67
VEGFA-207ENST00000413642 ACOT7LQ6ZUV0 252 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 OR11H2Q8NH07 326 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 GATAD1Q8WUU5 269 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 RAB40CQ96S21 281 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 SACSQ9NZJ4 4579 aa19.23■□□□□ 0.67
VEGFA-207ENST00000413642 FABP1P07148 127 aa19.22■□□□□ 0.67
VEGFA-207ENST00000413642 ZBTB8BQ8NAP8 495 aaPredicted RBP19.22■□□□□ 0.67
VEGFA-207ENST00000413642 GSKIPQ9P0R6 139 aa19.22■□□□□ 0.67
VEGFA-207ENST00000413642 CXorf65A6NEN9 183 aa19.21■□□□□ 0.67
VEGFA-207ENST00000413642 PMS2P5A8MQ11 134 aa19.21■□□□□ 0.67
VEGFA-207ENST00000413642 CCSO14618 274 aa19.21■□□□□ 0.67
VEGFA-207ENST00000413642 C4BPBP20851 252 aa19.21■□□□□ 0.67
VEGFA-207ENST00000413642 CNPY1Q3B7I2 92 aa19.21■□□□□ 0.67
VEGFA-207ENST00000413642 SEC22CQ9BRL7 303 aa19.21■□□□□ 0.67
VEGFA-207ENST00000413642 AKR1C1Q04828 323 aa19.2■□□□□ 0.66
VEGFA-207ENST00000413642 SMIM8Q96KF7 97 aa19.2■□□□□ 0.66
VEGFA-207ENST00000413642 CCDC32Q9BV29 185 aa19.2■□□□□ 0.66
VEGFA-207ENST00000413642 WDR12Q9GZL7 423 aaKnown RBP19.2■□□□□ 0.66
VEGFA-207ENST00000413642 DEFB4AO15263 64 aa19.19■□□□□ 0.66
VEGFA-207ENST00000413642 DEFB1P60022 68 aa19.19■□□□□ 0.66
VEGFA-207ENST00000413642 PPP1R14BQ96C90 147 aa19.19■□□□□ 0.66
VEGFA-207ENST00000413642 NUDT15Q9NV35 164 aa19.19■□□□□ 0.66
VEGFA-207ENST00000413642 SMCO3A2RU48 225 aa19.18■□□□□ 0.66
VEGFA-207ENST00000413642 NUP62P37198 522 aaPredicted RBP19.18■□□□□ 0.66
VEGFA-207ENST00000413642 PFDN2Q9UHV9 154 aa19.18■□□□□ 0.66
VEGFA-207ENST00000413642 RCL1Q9Y2P8 373 aaKnown RBP19.18■□□□□ 0.66
VEGFA-207ENST00000413642 A6NHS1 94 aa19.17■□□□□ 0.66
VEGFA-207ENST00000413642 METTL15P1P0C7V9 234 aa19.17■□□□□ 0.66
VEGFA-207ENST00000413642 RRAS2P62070 204 aaPredicted RBP19.17■□□□□ 0.66
VEGFA-207ENST00000413642 SNRPD3P62318 126 aaKnown RBP19.17■□□□□ 0.66
VEGFA-207ENST00000413642 TMEM14EPQ6UXP3 125 aa19.17■□□□□ 0.66
VEGFA-207ENST00000413642 CLEC5AQ9NY25 188 aa19.17■□□□□ 0.66
VEGFA-207ENST00000413642 TBC1D24Q9ULP9 559 aa19.17■□□□□ 0.66
VEGFA-207ENST00000413642 MBPP02686 304 aaPredicted RBP19.16■□□□□ 0.66
VEGFA-207ENST00000413642 ORM2P19652 201 aa19.16■□□□□ 0.66
VEGFA-207ENST00000413642 C1orf194Q5T5A4 169 aa19.16■□□□□ 0.66
VEGFA-207ENST00000413642 MORN3Q6PF18 240 aaPredicted RBP19.16■□□□□ 0.66
VEGFA-207ENST00000413642 TMEM144Q7Z5S9 345 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms