RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 RBMY1EA6NEQ0 496 aaKnown RBP4.76□□□□□ -1.65
USP54-202ENST00000413442 K7EPK0 472 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 BUB3O43684 328 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 H2AFB2P0C5Z0 115 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 RBMY1DP0C7P1 496 aaKnown RBP4.76□□□□□ -1.65
USP54-202ENST00000413442 PSG1P11464 419 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 BTCP35070 178 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 ID1P41134 155 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 P2RY1P47900 373 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 NUTF2P61970 127 aaKnown RBP4.76□□□□□ -1.65
USP54-202ENST00000413442 SNRPD3P62318 126 aaKnown RBP4.76□□□□□ -1.65
USP54-202ENST00000413442 POLR2GP62487 172 aaKnown RBP eCLIP4.76□□□□□ -1.65
USP54-202ENST00000413442 RPL11P62913 178 aaKnown RBP4.76□□□□□ -1.65
USP54-202ENST00000413442 DLK1P80370 383 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 SPINK9Q5DT21 86 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 HAPLN4Q86UW8 402 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 THAP8Q8NA92 274 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 BPIFCQ8NFQ6 507 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 OR10P1Q8NGE3 313 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 ZNF431Q8TF32 576 aaPredicted RBP4.76□□□□□ -1.65
USP54-202ENST00000413442 C1QTNF4Q9BXJ3 329 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 CSTL1Q9H114 145 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 C20orf85Q9H1P6 137 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 MS4A6AQ9H2W1 248 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 MAP6D1Q9H9H5 199 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 PSENENQ9NZ42 101 aa4.76□□□□□ -1.65
USP54-202ENST00000413442 MPTX1A8MV57 137 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 K7EQG2 157 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 SPRY2O43597 315 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 DEDDO75618 318 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 UPK1BO75841 260 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 IGHV3-48P01763 117 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 RLN2P04090 185 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 IL4P05112 153 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 SPP1P10451 314 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 LYL1P12980 280 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 PLP1P60201 277 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 RAB31Q13636 194 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 ATP6V1FQ16864 119 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 IAH1Q2TAA2 248 aaPredicted RBP4.75□□□□□ -1.65
USP54-202ENST00000413442 TIGITQ495A1 244 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 SPANXN5Q5MJ07 72 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 C11orf87Q6NUJ2 197 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 GSG1LQ6UXU4 331 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 C12orf45Q8N5I9 185 aaPredicted RBP4.75□□□□□ -1.65
USP54-202ENST00000413442 ZBTB8BQ8NAP8 495 aaPredicted RBP4.75□□□□□ -1.65
USP54-202ENST00000413442 CHAC2Q8WUX2 184 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 TMEM170AQ8WVE7 144 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 ST8SIA2Q92186 375 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 RNF183Q96D59 192 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 RNF125Q96EQ8 232 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 ACY3Q96HD9 319 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 ZNF414Q96IQ9 312 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 C2orf50Q96LR7 162 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 EDA2RQ9HAV5 297 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 NRN1Q9NPD7 142 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 CLEC5AQ9NY25 188 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 MGAT4CQ9UBM8 478 aa4.75□□□□□ -1.65
USP54-202ENST00000413442 PRKDCP78527 4128 aaKnown RBP4.75□□□□□ -1.65
USP54-202ENST00000413442 ELOA3CA0A087WX78 387 aaPredicted RBP4.74□□□□□ -1.65
USP54-202ENST00000413442 PRSS46E5RG02 174 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 L7N2F9 121 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 ISLRO14498 428 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 ZNF207O43670 478 aaKnown RBP4.74□□□□□ -1.65
USP54-202ENST00000413442 ADAP1O75689 374 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 S100A11P31949 105 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 VAMP2P63027 116 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 ODF3L2Q3SX64 289 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 TEPPQ6URK8 271 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 TMEM14EPQ6UXP3 125 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 SIGLEC15Q6ZMC9 328 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 STHQ8IWL8 128 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 OR1B1Q8NGR6 318 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 ENKURQ8TC29 256 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 DCANP1Q8TF63 244 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 GLMPQ8WWB7 406 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 MARVELD1Q9BSK0 173 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 NUDT15Q9NV35 164 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 MRPL36Q9P0J6 103 aaKnown RBP4.74□□□□□ -1.65
USP54-202ENST00000413442 FLVCR2Q9UPI3 526 aa4.74□□□□□ -1.65
USP54-202ENST00000413442 IGKV1D-37A0A075B6S9 117 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 LINC00854A0A1B0GVQ3 168 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 C5orf51A6NDU8 294 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 MPDU1O75352 247 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 NXPH3O95157 252 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 ANXA7P20073 488 aaKnown RBP4.73□□□□□ -1.65
USP54-202ENST00000413442 EDN2P20800 178 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 GALR1P47211 349 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 PSMB3P49720 205 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 TCTAP57738 103 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 RAP2BP61225 183 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 HBG1P69891 147 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 HBG2P69892 147 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 CASC10Q5T4H9 136 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 OR8I2Q8N0Y5 310 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 OVOL2Q9BRP0 275 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 TMEM147Q9BVK8 224 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 PRR13Q9NZ81 148 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 GSKIPQ9P0R6 139 aa4.73□□□□□ -1.65
USP54-202ENST00000413442 TRAV6A0A075B6T7 132 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms