RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GTSF1Q8WW33 167 aa14.17□□□□□ -0.14
SDCBP-202ENST00000413219 TMEM186Q96B77 213 aa14.17□□□□□ -0.14
SDCBP-202ENST00000413219 WASHC3Q9Y3C0 194 aa14.17□□□□□ -0.14
SDCBP-202ENST00000413219 PLAUP00749 431 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 CDKN1BP46527 198 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 C10orf55Q5SWW7 151 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 BLNKQ8WV28 456 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 C22orf46C9J442 243 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 NPIPB6E9PJ23 425 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 LIPFP07098 398 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 SP9P0CG40 484 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 VMA21Q3ZAQ7 101 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 SLC25A34Q6PIV7 304 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 PET117Q6UWS5 81 aa14.16□□□□□ -0.14
SDCBP-202ENST00000413219 LINC00322Q6ZN03 302 aaPredicted RBP14.16□□□□□ -0.14
SDCBP-202ENST00000413219 DAZAP1Q96EP5 407 aaKnown RBP14.16□□□□□ -0.14
SDCBP-202ENST00000413219 INTS1Q8N201 2190 aaKnown RBP14.15□□□□□ -0.14
SDCBP-202ENST00000413219 KNTC1P50748 2209 aa14.15□□□□□ -0.14
SDCBP-202ENST00000413219 LOC102724200A0A096LPH7 203 aaPredicted RBP14.15□□□□□ -0.14
SDCBP-202ENST00000413219 SH2D7A6NKC9 451 aaPredicted RBP14.15□□□□□ -0.14
SDCBP-202ENST00000413219 TCRAP04437 139 aa14.15□□□□□ -0.14
SDCBP-202ENST00000413219 GP9P14770 177 aa14.15□□□□□ -0.14
SDCBP-202ENST00000413219 ORM2P19652 201 aa14.15□□□□□ -0.14
SDCBP-202ENST00000413219 RHOGP84095 191 aa14.15□□□□□ -0.14
SDCBP-202ENST00000413219 ANKRD39Q53RE8 183 aa14.15□□□□□ -0.14
SDCBP-202ENST00000413219 OR4C5Q8NGB2 326 aa14.15□□□□□ -0.14
SDCBP-202ENST00000413219 OR1B1Q8NGR6 318 aa14.15□□□□□ -0.14
SDCBP-202ENST00000413219 PGLYRP4Q96LB8 373 aa14.15□□□□□ -0.14
SDCBP-202ENST00000413219 A0A1W2PPI3 338 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 HSBP1L1C9JCN9 74 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 IGHV3-48P01763 117 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 HLA-DRB1P01911 266 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 FOXA3P55318 350 aaPredicted RBP14.14□□□□□ -0.15
SDCBP-202ENST00000413219 PLP1P60201 277 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 TMEM190Q8WZ59 177 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 MS4A6AQ9H2W1 248 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 ZNF137PP52743 207 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 MPV17L2Q567V2 206 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 C12orf54Q6X4T0 127 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 ST6GALNAC6Q969X2 333 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 PCNX2A6NKB5 2137 aa14.14□□□□□ -0.15
SDCBP-202ENST00000413219 HAX1O00165 279 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 CCL3L1P16619 93 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 TNFRSF1AP19438 455 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 PAX2Q02962 417 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 SAPCD1Q5SSQ6 148 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 SGK494Q96LW2 274 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 MAP1LC3CQ9BXW4 147 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 Q9H3A6 140 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 RPH3ALQ9UNE2 315 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 URB1O60287 2271 aaKnown RBP14.13□□□□□ -0.15
SDCBP-202ENST00000413219 CHEK1O14757 476 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 MC5RP33032 325 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 TMEM200BQ69YZ2 307 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 LINC00173Q6ZV60 143 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 TMEM116Q8NCL8 245 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 HSPB8Q9UJY1 196 aa14.13□□□□□ -0.15
SDCBP-202ENST00000413219 M0QZ24 198 aa14.12□□□□□ -0.15
SDCBP-202ENST00000413219 TAX1BP3O14907 124 aa14.12□□□□□ -0.15
SDCBP-202ENST00000413219 LGALS7P47929 136 aa14.12□□□□□ -0.15
SDCBP-202ENST00000413219 VAMP3Q15836 100 aa14.12□□□□□ -0.15
SDCBP-202ENST00000413219 BVES-AS1Q5T3Y7 98 aa14.12□□□□□ -0.15
SDCBP-202ENST00000413219 C16orf54Q6UWD8 224 aa14.12□□□□□ -0.15
SDCBP-202ENST00000413219 DEFB125Q8N687 156 aa14.12□□□□□ -0.15
SDCBP-202ENST00000413219 NUP37Q8NFH4 326 aa14.12□□□□□ -0.15
SDCBP-202ENST00000413219 SCRT2Q9NQ03 307 aa14.12□□□□□ -0.15
SDCBP-202ENST00000413219 TRBV6-1A0A0K0K1D8 114 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 hDV102S1A0JD36 115 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 MRGPRG-AS1Q2M3A8 158 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 C8orf46Q8TAG6 207 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 OTORQ9NRC9 128 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 DMDP11532 3685 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 TRIOBPQ9H2D6 2365 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 ZDBF2Q9HCK1 2354 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 SLC25A17O43808 307 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 NUDT3O95989 172 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 CD40P25942 277 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 Q86TA4 180 aa14.11□□□□□ -0.15
SDCBP-202ENST00000413219 GSX1Q9H4S2 264 aaPredicted RBP14.11□□□□□ -0.15
SDCBP-202ENST00000413219 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.1□□□□□ -0.15
SDCBP-202ENST00000413219 APOHP02749 345 aaPredicted RBP14.1□□□□□ -0.15
SDCBP-202ENST00000413219 WT1P19544 449 aaPredicted RBP14.1□□□□□ -0.15
SDCBP-202ENST00000413219 SRSF6Q13247 344 aaKnown RBP14.1□□□□□ -0.15
SDCBP-202ENST00000413219 TEX45Q8NA69 505 aa14.1□□□□□ -0.15
SDCBP-202ENST00000413219 H1FXQ92522 213 aaKnown RBP14.1□□□□□ -0.15
SDCBP-202ENST00000413219 CELSR3Q9NYQ7 3312 aa14.1□□□□□ -0.15
SDCBP-202ENST00000413219 HOXB4P17483 251 aaPredicted RBP14.1□□□□□ -0.15
SDCBP-202ENST00000413219 DIAPH2-AS1Q14236 149 aa14.1□□□□□ -0.15
SDCBP-202ENST00000413219 GATD1Q8NB37 220 aa14.1□□□□□ -0.15
SDCBP-202ENST00000413219 GUCD1Q96NT3 240 aa14.1□□□□□ -0.15
SDCBP-202ENST00000413219 TMEM14CQ9P0S9 112 aa14.1□□□□□ -0.15
SDCBP-202ENST00000413219 ZNF835Q9Y2P0 537 aa14.1□□□□□ -0.15
SDCBP-202ENST00000413219 FAM215AQ9Y5M1 114 aa14.1□□□□□ -0.15
SDCBP-202ENST00000413219 DYSFO75923 2080 aa14.09□□□□□ -0.15
SDCBP-202ENST00000413219 CD24P25063 80 aa14.09□□□□□ -0.15
SDCBP-202ENST00000413219 COL8A1P27658 744 aa14.09□□□□□ -0.15
SDCBP-202ENST00000413219 C1orf185Q5T7R7 199 aa14.09□□□□□ -0.15
SDCBP-202ENST00000413219 LINC01545Q5VT33 79 aa14.09□□□□□ -0.15
SDCBP-202ENST00000413219 TPSG1Q9NRR2 321 aa14.09□□□□□ -0.15
SDCBP-202ENST00000413219 FCN3O75636 299 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms