RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 C10orf113Q5VZT2 155 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 VWA1Q6PCB0 445 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 DAZAP1Q96EP5 407 aaKnown RBP8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 GRAMD2BQ96HH9 432 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 AP1S3Q96PC3 154 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 ZPBPQ9BS86 351 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 SLC25A2Q9BXI2 301 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 COMMD5Q9GZQ3 224 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 TMEM14BQ9NUH8 114 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 JPT1Q9UK76 154 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 PCNX1Q96RV3 2341 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 LAMA5O15230 3695 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 TEX50A0A1B0GTY4 177 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 E7EUB6 86 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 NTN3O00634 580 aaPredicted RBP8□□□□□ -1.13
PTCHD4-202ENST00000398738 HIST1H1EP10412 219 aaKnown RBP8□□□□□ -1.13
PTCHD4-202ENST00000398738 Q71RC1 249 aaPredicted RBP8□□□□□ -1.13
PTCHD4-202ENST00000398738 PPP1R35Q8TAP8 253 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 TMEM191AQ9H0A3 160 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 LOC389332A0A1B0GUA5 103 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 A0A1W2PRD5 423 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 A0A1W2PRF3 423 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 A0A1W2PRM7 423 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 GAGE10A6NGK3 116 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 HCP5Q6MZN7 132 aa8□□□□□ -1.13
PTCHD4-202ENST00000398738 EP300Q09472 2414 aaPredicted RBP8□□□□□ -1.13
PTCHD4-202ENST00000398738 C7orf71A4D174 169 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 C21orf140B9A014 251 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 MGST3O14880 152 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 ARF6P62330 175 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 HBBP68871 147 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 LINC00305Q7Z4B0 112 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 WFDC3Q8IUB2 231 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 OR8A1Q8NGG7 326 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 FAM167A-AS1Q96KT0 104 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 MAP1LC3CQ9BXW4 147 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 TRGV8A0A0C4DH27 118 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 FBLL1A6NHQ2 334 aaKnown RBP7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 PRSS47A8MTI9 375 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 KLRC4-KLRK1H3BQV0 150 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 P01737 135 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 SAA1P0DJI8 122 aaPredicted RBP7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 HTR1DP28221 377 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 PRB3Q04118 309 aaPredicted RBP7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 ZNF329Q86UD4 541 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 GCSAMQ8N6F7 178 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 MBD6Q96DN6 1003 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 CCDC140Q96MF4 163 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 CCL13Q99616 98 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 FOXA2Q9Y261 457 aaPredicted RBP7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 KALRNO60229 2985 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 K7ERU9 68 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 PMS2CLQ68D20 193 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 C12orf54Q6X4T0 127 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 FAM90A1Q86YD7 464 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 PDPNQ86YL7 162 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 MRPL36Q9P0J6 103 aaKnown RBP7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 WNK2Q9Y3S1 2297 aa7.99□□□□□ -1.13
PTCHD4-202ENST00000398738 FAM231BA6NCW3 169 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 H3BUT2 72 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 BHLHA15Q7RTS1 189 aaPredicted RBP7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 DEFB125Q8N687 156 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 GTSF1Q8WW33 167 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 HARBI1Q96MB7 349 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 ST20Q9HBF5 79 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 PRNDQ9UKY0 176 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 WIPF1O43516 503 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 GPR183P32249 361 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 CD69Q07108 199 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 PATE2Q6UY27 113 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 CIARTQ8N365 385 aaPredicted RBP7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 FAM216BQ8N7L0 139 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 DDB2Q92466 427 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 ATMQ13315 3056 aa7.98□□□□□ -1.13
PTCHD4-202ENST00000398738 IGHV3-72A0A0B4J1Y9 119 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 UPK2O00526 184 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 RNASE2P10153 161 aaKnown RBP7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 ERHP84090 104 aaKnown RBP7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 PRCDQ00LT1 54 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 MSMPQ1L6U9 139 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 BPIFA4PQ86YQ2 179 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 ITLN1Q8WWA0 313 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 TMSB15BA0A087X1C1 80 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 SERTM2A0A1B0GWG4 89 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 hADV38S2A0JD32 116 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 FAM90A9PA6NNJ1 464 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 C17orf58Q2M2W7 97 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 FAM120AOSQ5T036 256 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 PRSS57Q6UWY2 283 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 CSTL1Q9H114 145 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 EPDR1Q9UM22 224 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 ADGRG4Q8IZF6 3080 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 SPTBN2O15020 2390 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 SPENQ96T58 3664 aaKnown RBP7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 CACNA1BQ00975 2339 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 TACC2O95359 2948 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 NCR2O95944 276 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 CT45A6P0DMU7 189 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 CT45A5P0DMU8 189 aa7.97□□□□□ -1.13
PTCHD4-202ENST00000398738 CT45A7P0DMV0 189 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms