RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 FLG2Q5D862 2391 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 GGCTO75223 188 aaKnown RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 MOSP00540 346 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 MAS1LP35410 378 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF137PP52743 207 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 GNG5P63218 68 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 OR4A47Q6IF82 309 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF474Q6S9Z5 364 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 TCTEX1D1Q8N7M0 179 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 SAP30LQ9HAJ7 183 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 C15orf65H3BRN8 121 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 GFRA3O60609 400 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 PYYP10082 97 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 PRTN3P24158 256 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 OR10W1Q8NGF6 305 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 OR9G1Q8NH87 305 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 A6NDN8 102 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 SIAH2O43255 324 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 HIST1H1BP16401 226 aaKnown RBP4.05□□□□□ -1.76
SMAD4-202ENST00000398417 MYOZ3Q8TDC0 251 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 NEUROG1Q92886 237 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 MGST2Q99735 147 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 YPEL1O60688 119 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 OR1B1Q8NGR6 318 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 VN1R17PQ8TDU5 208 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 YPEL2Q96QA6 119 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 ASCL2Q99929 193 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 C16orf97H3BN30 126 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 VENTXO95231 258 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 LINC00869P0C866 280 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 DTX2Q86UW9 622 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 ATP6V0BQ99437 205 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 A0A1W2PN81 502 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 C8orf88P0DMB2 117 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 LMO1P25800 156 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 HIST1H4AP62805 103 aaKnown RBP4.05□□□□□ -1.76
SMAD4-202ENST00000398417 LINC01551Q86U37 167 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 MUC15Q8N387 334 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 C14orf144Q96I85 54 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 SPATA25Q9BR10 227 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 DNAJC4Q9NNZ3 241 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 TEX50A0A1B0GTY4 177 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 S4R3C0 116 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 USP17L23D6RBM5 183 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 MKRN2OSH3BPM6 223 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 H7C2G1 150 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 NUPR1O60356 82 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 PROP1O75360 226 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 MMP23AO75900 390 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 PLA2G2CQ5R387 149 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 GBGT1Q8N5D6 347 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 LINC01560Q8TB33 94 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 NCOR1P1Q9H4R4 102 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 ASCL3Q9NQ33 180 aa4.05□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF106Q9H2Y7 1883 aaKnown RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 DIAPH2-AS1Q14236 149 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 C1orf162Q8NEQ5 155 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 OR1L4Q8NGR5 311 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 AGMATQ9BSE5 352 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 CSMD1Q96PZ7 3565 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 NBPF19A0A087WUL8 3843 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 TRAV41A0A0B4J266 112 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 SRRM5B3KS81 715 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 PLP1P60201 277 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 NHLH1Q02575 133 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 UBE2V1Q13404 147 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 JOSD1Q15040 202 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 C17orf58Q2M2W7 97 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 CYB5R2Q6BCY4 276 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 LYPD2Q6UXB3 125 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF664Q8N3J9 261 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 IL19Q9UHD0 177 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 PLXNB3Q9ULL4 1909 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 M0QZ24 198 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 TNFSF13O75888 250 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 GPR6P46095 362 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 EFNB3Q15768 340 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 ADIPOQQ15848 244 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 CENPWQ5EE01 88 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 TEX38Q6PEX7 206 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM242Q9NWH2 141 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 TRAV9-1A0A075B6T8 112 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 CRLF1O75462 422 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 APCSP02743 223 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF25P17030 456 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 RPL31P62899 125 aaKnown RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 Q8TCH9 128 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 C15orf61A6NNL5 157 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 PRSS47A8MTI9 375 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 CORTO00230 105 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 CSN3P07498 182 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 KCNS1Q96KK3 526 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 RNASE7Q9H1E1 156 aaKnown RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 OTOGLQ3ZCN5 2332 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 KIAA1549LQ6ZVL6 1849 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 SERF1AO75920 110 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 FRMD6-AS1P0C7T7 363 aa4.04□□□□□ -1.76
SMAD4-202ENST00000398417 SSBP2P81877 361 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 IBA57Q5T440 356 aaKnown RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF788Q6ZQV5 615 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms