RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 KIR2DL5AQ8N109 375 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 KIR2DL5BQ8NHK3 375 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 RNF125Q96EQ8 232 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 STRAPQ9Y3F4 350 aaKnown RBP12.95□□□□□ -0.34
UPK3A-202ENST00000396082 SSSCA1O60232 199 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 TCRBP04435 133 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 POLR2GP62487 172 aaKnown RBP eCLIP12.94□□□□□ -0.34
UPK3A-202ENST00000396082 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 C16orf54Q6UWD8 224 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 Q6ZWC4 215 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 MITD1Q8WV92 249 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 OVOL2Q9BRP0 275 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 NUDT15Q9NV35 164 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 PFDN2Q9UHV9 154 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 U3KQE9 123 aa12.94□□□□□ -0.34
UPK3A-202ENST00000396082 SPRY2O43597 315 aa12.93□□□□□ -0.34
UPK3A-202ENST00000396082 NUP62P37198 522 aaPredicted RBP12.93□□□□□ -0.34
UPK3A-202ENST00000396082 AP2S1P53680 142 aaPredicted RBP12.93□□□□□ -0.34
UPK3A-202ENST00000396082 LYZP61626 148 aa12.93□□□□□ -0.34
UPK3A-202ENST00000396082 ID3Q02535 119 aa12.93□□□□□ -0.34
UPK3A-202ENST00000396082 ZNF90Q03938 601 aa12.93□□□□□ -0.34
UPK3A-202ENST00000396082 OR2F1Q13607 317 aa12.93□□□□□ -0.34
UPK3A-202ENST00000396082 IAH1Q2TAA2 248 aaPredicted RBP12.93□□□□□ -0.34
UPK3A-202ENST00000396082 FAM24BQ8N5W8 94 aa12.93□□□□□ -0.34
UPK3A-202ENST00000396082 OR4D5Q8NGN0 318 aa12.93□□□□□ -0.34
UPK3A-202ENST00000396082 GLMPQ8WWB7 406 aa12.93□□□□□ -0.34
UPK3A-202ENST00000396082 PSENENQ9NZ42 101 aa12.93□□□□□ -0.34
UPK3A-202ENST00000396082 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 FAM240BA0A1B0GVZ2 78 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 SNRPGP15A8MWD9 76 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 K7EQG2 157 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 ZNF688P0C7X2 276 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 AKR1C1Q04828 323 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 MZT2BQ6NZ67 158 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 IL17DQ8TAD2 202 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 TRGV9Q99603 122 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 GSKIPQ9P0R6 139 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
UPK3A-202ENST00000396082 A6NHS1 94 aa12.91□□□□□ -0.34
UPK3A-202ENST00000396082 BUB3O43684 328 aa12.91□□□□□ -0.34
UPK3A-202ENST00000396082 ZNF846Q147U1 533 aa12.91□□□□□ -0.34
UPK3A-202ENST00000396082 OR8G2PQ6IF36 304 aa12.91□□□□□ -0.34
UPK3A-202ENST00000396082 SIGLEC15Q6ZMC9 328 aa12.91□□□□□ -0.34
UPK3A-202ENST00000396082 ACOT7LQ6ZUV0 252 aa12.91□□□□□ -0.34
UPK3A-202ENST00000396082 STHQ8IWL8 128 aa12.91□□□□□ -0.34
UPK3A-202ENST00000396082 ZBTB8BQ8NAP8 495 aaPredicted RBP12.91□□□□□ -0.34
UPK3A-202ENST00000396082 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
UPK3A-202ENST00000396082 CSTL1Q9H114 145 aa12.91□□□□□ -0.34
UPK3A-202ENST00000396082 SMCO3A2RU48 225 aa12.9□□□□□ -0.34
UPK3A-202ENST00000396082 FAM25EA8MYX2 175 aa12.9□□□□□ -0.34
UPK3A-202ENST00000396082 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
UPK3A-202ENST00000396082 THAP8Q8NA92 274 aa12.9□□□□□ -0.34
UPK3A-202ENST00000396082 DCANP1Q8TF63 244 aa12.9□□□□□ -0.34
UPK3A-202ENST00000396082 WDR12Q9GZL7 423 aaKnown RBP12.9□□□□□ -0.34
UPK3A-202ENST00000396082 PTTG2Q9NZH5 202 aa12.9□□□□□ -0.34
UPK3A-202ENST00000396082 PRSS46E5RG02 174 aa12.89□□□□□ -0.35
UPK3A-202ENST00000396082 CCSO14618 274 aa12.89□□□□□ -0.35
UPK3A-202ENST00000396082 ZNF431Q8TF32 576 aaPredicted RBP12.89□□□□□ -0.35
UPK3A-202ENST00000396082 RNF183Q96D59 192 aa12.89□□□□□ -0.35
UPK3A-202ENST00000396082 SMIM8Q96KF7 97 aa12.89□□□□□ -0.35
UPK3A-202ENST00000396082 RAB40CQ96S21 281 aa12.89□□□□□ -0.35
UPK3A-202ENST00000396082 SEC22CQ9BRL7 303 aa12.89□□□□□ -0.35
UPK3A-202ENST00000396082 IGKV1OR2-108A0A075B7D4 117 aa12.88□□□□□ -0.35
UPK3A-202ENST00000396082 CFDP00746 253 aaPredicted RBP12.88□□□□□ -0.35
UPK3A-202ENST00000396082 CA1P00915 261 aaPredicted RBP12.88□□□□□ -0.35
UPK3A-202ENST00000396082 SNRPD3P62318 126 aaKnown RBP12.88□□□□□ -0.35
UPK3A-202ENST00000396082 PSMG4Q5JS54 123 aa12.88□□□□□ -0.35
UPK3A-202ENST00000396082 ENKURQ8TC29 256 aa12.88□□□□□ -0.35
UPK3A-202ENST00000396082 NRN1Q9NPD7 142 aa12.88□□□□□ -0.35
UPK3A-202ENST00000396082 TBC1D24Q9ULP9 559 aa12.88□□□□□ -0.35
UPK3A-202ENST00000396082 NBEAL2Q6ZNJ1 2754 aa12.88□□□□□ -0.35
UPK3A-202ENST00000396082 A0A0J9YWU9 116 aa12.87□□□□□ -0.35
UPK3A-202ENST00000396082 C5orf51A6NDU8 294 aa12.87□□□□□ -0.35
UPK3A-202ENST00000396082 ASAH1Q13510 395 aa12.87□□□□□ -0.35
UPK3A-202ENST00000396082 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
UPK3A-202ENST00000396082 BPIFCQ8NFQ6 507 aa12.87□□□□□ -0.35
UPK3A-202ENST00000396082 FBXL17Q9UF56 701 aa12.87□□□□□ -0.35
UPK3A-202ENST00000396082 KNCNA6PVL3 124 aa12.86□□□□□ -0.35
UPK3A-202ENST00000396082 L7N2F9 121 aa12.86□□□□□ -0.35
UPK3A-202ENST00000396082 TSC22D2O75157 780 aa12.86□□□□□ -0.35
UPK3A-202ENST00000396082 METTL15P1P0C7V9 234 aa12.86□□□□□ -0.35
UPK3A-202ENST00000396082 RRAS2P62070 204 aaPredicted RBP12.86□□□□□ -0.35
UPK3A-202ENST00000396082 VAMP2P63027 116 aa12.86□□□□□ -0.35
UPK3A-202ENST00000396082 ACTL10Q5JWF8 245 aa12.86□□□□□ -0.35
UPK3A-202ENST00000396082 TMEM144Q7Z5S9 345 aa12.86□□□□□ -0.35
UPK3A-202ENST00000396082 OR10P1Q8NGE3 313 aa12.86□□□□□ -0.35
UPK3A-202ENST00000396082 MGAT4CQ9UBM8 478 aa12.86□□□□□ -0.35
UPK3A-202ENST00000396082 RCL1Q9Y2P8 373 aaKnown RBP12.86□□□□□ -0.35
UPK3A-202ENST00000396082 LSM5Q9Y4Y9 91 aaKnown RBP12.86□□□□□ -0.35
UPK3A-202ENST00000396082 UPK1BO75841 260 aa12.85□□□□□ -0.35
UPK3A-202ENST00000396082 CCNKO75909 580 aa12.85□□□□□ -0.35
UPK3A-202ENST00000396082 MBPP02686 304 aaPredicted RBP12.85□□□□□ -0.35
UPK3A-202ENST00000396082 ORM2P19652 201 aa12.85□□□□□ -0.35
UPK3A-202ENST00000396082 S100A7P31151 101 aa12.85□□□□□ -0.35
UPK3A-202ENST00000396082 PAX9P55771 341 aa12.85□□□□□ -0.35
UPK3A-202ENST00000396082 TAS2R30P59541 319 aa12.85□□□□□ -0.35
UPK3A-202ENST00000396082 C1orf194Q5T5A4 169 aa12.85□□□□□ -0.35
UPK3A-202ENST00000396082 TMEM14EPQ6UXP3 125 aa12.85□□□□□ -0.35
UPK3A-202ENST00000396082 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
UPK3A-202ENST00000396082 GATAD1Q8WUU5 269 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms