RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FBXL7Q9UJT9 491 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 TRAV9-2A0A087WT02 112 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 A0A1W2PNU3 283 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 OR8A1Q8NGG7 326 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 TNRC6AQ8NDV7 1962 aaKnown RBP9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 NCOR2Q9Y618 2525 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 SCGB2A2Q13296 93 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 DUX4L9Q6RFH8 374 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 LINC00479Q96M42 142 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 RAB1BQ9H0U4 201 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 FBXL15Q9H469 300 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 KIR2DL5BA0A0G2JN68 375 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 KIR2DL5BA0A0G2JPC4 375 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 HLA-DRB1P01911 266 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 TMEM200BQ69YZ2 307 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 KIR2DL5AQ8N109 375 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 NUP35Q8NFH5 326 aa9.5□□□□□ -0.89
UBE2D3-209ENST00000394804 PPIAL4CA0A0B4J2A2 164 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 A0A1W2PS18 150 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 FAM87AP0C7U9 286 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 PPIAL4GP0DN37 164 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 SPTBN1Q01082 2364 aaKnown RBP9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 ARL3P36405 182 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 TEX45Q8NA69 505 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 Q8TCH9 128 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 AP5S1Q9NUS5 200 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 KIAA1549Q9HCM3 1950 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 TMEM11P17152 192 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 FCGR2BP31994 310 aaPredicted RBP9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 TMEM133Q9H2Q1 129 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 FREM2Q5SZK8 3169 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 A0A1B0GUT8 65 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 TMEM189A5PLL7 270 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 BMPR1BO00238 502 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 NUPR1O60356 82 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 TEX43Q6ZNM6 134 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 TMEM208Q9BTX3 173 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 OTORQ9NRC9 128 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 HILPDAQ9Y5L2 63 aa9.49□□□□□ -0.89
UBE2D3-209ENST00000394804 CEP295Q9C0D2 2601 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 EIF4EBP1Q13541 118 aaPredicted RBP9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 OR10AG1Q8NH19 301 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 NDUFA4L2Q9NRX3 87 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 IGLV3-9A0A075B6K5 115 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 FOXC1Q12948 553 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 LCN12Q6JVE5 192 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 NIT1Q86X76 327 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 PNKDQ8N490 385 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 LOC389332A0A1B0GUA5 103 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 MMP23AO75900 390 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 IL4P05112 153 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 ZNF329Q86UD4 541 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 DDB2Q92466 427 aa9.48□□□□□ -0.89
UBE2D3-209ENST00000394804 C21orf62-AS1Q17RA5 79 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 PPP1R27Q86WC6 154 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 ST6GALNAC6Q969X2 333 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 LPAR2Q9HBW0 351 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 FAM181BA6NEQ2 426 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 B9A039 149 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 TMEM178BH3BS89 294 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 ORM1P02763 201 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 C3orf36Q3SXR2 165 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 C18orf32Q8TCD1 76 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 TRGV9Q99603 122 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 CLEC5AQ9NY25 188 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 NBASA2RRP1 2371 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 TRAV30A0A087WSZ9 112 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 SRRM4A7MD48 611 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 PROP1O75360 226 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 NUP37Q8NFH4 326 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 DCAF16Q9NXF7 216 aa9.47□□□□□ -0.89
UBE2D3-209ENST00000394804 F2Z2F3 143 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 APOBEC3AP31941 199 aaPredicted RBP9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 MFAP4P55083 255 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 TPTE2P1Q5T6R2 138 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 FAM71F2Q6NXP2 309 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 ZNF833PQ6ZTB9 187 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 C8orf46Q8TAG6 207 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 SMIM27A0A1W2PRY6 76 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 CCDC144NLQ6NUI1 221 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 PIP4P1Q86T03 277 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 OR5AN1Q8NGI8 311 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 RNASE6Q93091 150 aaKnown RBP9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 SLC25A2Q9BXI2 301 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 ZFP30Q9Y2G7 519 aa9.46□□□□□ -0.89
UBE2D3-209ENST00000394804 HCFC1P51610 2035 aa9.46□□□□□ -0.9
UBE2D3-209ENST00000394804 LINC00614P0C842 121 aa9.46□□□□□ -0.9
UBE2D3-209ENST00000394804 CHCHD1Q96BP2 118 aaKnown RBP9.46□□□□□ -0.9
UBE2D3-209ENST00000394804 TCRAP04437 139 aa9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 LHFPL4Q7Z7J7 247 aa9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 RPRMLQ8N4K4 120 aa9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 TNFRSF14Q92956 283 aa9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 IGHV1-8P0DP01 117 aa9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 SP5Q6BEB4 398 aaPredicted RBP9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 C1RLQ9NZP8 487 aa9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 ZGRF1Q86YA3 2104 aa9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 ABCA4P78363 2273 aa9.45□□□□□ -0.9
UBE2D3-209ENST00000394804 A0A1W2PPI3 338 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms