RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 SRSF1Q07955 248 aaKnown RBP eCLIP12.58□□□□□ -0.39
PTGFRN-201ENST00000393203 ZNF479Q96JC4 524 aa12.58□□□□□ -0.39
PTGFRN-201ENST00000393203 PAX2Q02962 417 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 TMEM133Q9H2Q1 129 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 C3orf79P0CE67 100 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 FAM90A1Q86YD7 464 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 EREGO14944 169 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 UCNP55089 124 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 MPV17L2Q567V2 206 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 FAM166AQ6J272 317 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 CHCHD1Q96BP2 118 aaKnown RBP12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 SIGMAR1Q99720 223 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 TIMM23O14925 209 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 ANAPC13Q9BS18 74 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 VCX2Q9H322 139 aa12.58□□□□□ -0.4
PTGFRN-201ENST00000393203 CKS1BP61024 79 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 GUSBP1Q15486 140 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 IGFL4Q6B9Z1 124 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 DPH3Q96FX2 82 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 IGLV3-32A0A0A0MS00 114 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 QRFPP83859 136 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 RHOGP84095 191 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 GGNQ86UU5 652 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 WNK3Q9BYP7 1800 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 NTF4P34130 210 aa12.57□□□□□ -0.4
PTGFRN-201ENST00000393203 LINC00473A8K010 186 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 C8orf46Q8TAG6 207 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 H3BRM9 83 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 TCRAP04437 139 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 NUP35Q8NFH5 326 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 FAM57AQ8TBR7 257 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 A0A1B0GW64 132 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 CNTFRP26992 372 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 AKAP6Q13023 2319 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 IGLV3-19P01714 112 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 MLANAQ16655 118 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 CD177Q8N6Q3 437 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 TRAV8-1A0A0A6YYK1 113 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 PVRIGQ6DKI7 326 aa12.56□□□□□ -0.4
PTGFRN-201ENST00000393203 LOC102723996A0A087X1L8 192 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 MST1LQ2TV78 715 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 TRAV1-1A0A0B4J248 108 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 IGHV1-46P01743 117 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 MRPS18CQ9Y3D5 142 aaKnown RBP12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 E9PLN8 166 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 LYZL1Q6UWQ5 148 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 IFI27P40305 119 aaPredicted RBP12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 HSD52Q0P140 79 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 TPTE2P1Q5T6R2 138 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 C20orf204Q6ZNR8 217 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 Q6ZRM9 215 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 COLCA1Q6ZS62 124 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 Q8TAT8 98 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 NPFFR1Q9GZQ6 430 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 PSG1P11464 419 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 HTN3P15516 51 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 KLF17Q5JT82 389 aaPredicted RBP12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 TEX29Q8N6K0 151 aa12.55□□□□□ -0.4
PTGFRN-201ENST00000393203 A0A0G2JLM5 398 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 LCNL1Q6ZST4 164 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 LINC00479Q96M42 142 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 C7orf69Q9H7B7 122 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 NXT2Q9NPJ8 142 aaKnown RBP12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 PGPEP1Q9NXJ5 209 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 RPUSD1Q9UJJ7 312 aaKnown RBP12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 GAGE13Q4V321 117 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 TMEM105Q8N8V8 129 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 PRTN3P24158 256 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 TDGF1P13385 188 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 TMEM14EPQ6UXP3 125 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 TRGV2A0A075B6R0 118 aa12.54□□□□□ -0.4
PTGFRN-201ENST00000393203 FAM90A2PQ658T7 463 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 CYSLTR1Q9Y271 337 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 PF4P02776 101 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 PAX1P15863 534 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 C1orf122Q6ZSJ8 110 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 SPOCK3Q9BQ16 436 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 CD28P10747 220 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 ERVK11-1P61568 191 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 KLRD1Q13241 179 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 ATP5L2Q7Z4Y8 100 aa12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 SLC25A39Q9BZJ4 359 aaPredicted RBP12.53□□□□□ -0.4
PTGFRN-201ENST00000393203 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.4
PTGFRN-201ENST00000393203 SRSF4Q08170 494 aaKnown RBP12.52□□□□□ -0.4
PTGFRN-201ENST00000393203 CACNA1EQ15878 2313 aa12.52□□□□□ -0.4
PTGFRN-201ENST00000393203 SEC11AP67812 179 aa12.52□□□□□ -0.41
PTGFRN-201ENST00000393203 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
PTGFRN-201ENST00000393203 FER1L5A0AVI2 2057 aa12.51□□□□□ -0.41
PTGFRN-201ENST00000393203 SPSB3Q6PJ21 355 aa12.51□□□□□ -0.41
PTGFRN-201ENST00000393203 CRIPAKQ8N1N5 446 aa12.51□□□□□ -0.41
PTGFRN-201ENST00000393203 SLC50A1Q9BRV3 221 aa12.51□□□□□ -0.41
PTGFRN-201ENST00000393203 C11orf68Q9H3H3 251 aaKnown RBP12.51□□□□□ -0.41
PTGFRN-201ENST00000393203 CEP250Q9BV73 2442 aa12.51□□□□□ -0.41
PTGFRN-201ENST00000393203 TMEM155Q4W5P6 130 aa12.51□□□□□ -0.41
PTGFRN-201ENST00000393203 TMEM200BQ69YZ2 307 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms