RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF25P17030 456 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-202ENST00000377797 ADORA2A-AS1P86434 159 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 LINC00587B1AMM8 73 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 PSG1P11464 419 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 CD81P60033 236 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 KIAA1644Q3SXP7 199 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 SP5Q6BEB4 398 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-202ENST00000377797 RBPMS2Q6ZRY4 209 aaKnown RBP11.76□□□□□ -0.53
TCOF1-202ENST00000377797 GSX1Q9H4S2 264 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-202ENST00000377797 EBLN2Q6P2I7 272 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 MRPL18Q9H0U6 180 aaKnown RBP11.76□□□□□ -0.53
TCOF1-202ENST00000377797 A0A087WWC5 75 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 H3BUX3 64 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 DIAPH2-AS1Q14236 149 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 LINC00311Q8N616 119 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 C19orf35Q6ZS72 473 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 OR4B1Q8NGF8 309 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 MOB4Q9Y3A3 225 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 TRGC1P0CF51 173 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 KIR3DL3Q8N743 410 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 GNG5P63218 68 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 MST1LQ2TV78 715 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 TBL2Q9Y4P3 447 aaKnown RBP11.75□□□□□ -0.53
TCOF1-202ENST00000377797 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.75□□□□□ -0.53
TCOF1-202ENST00000377797 A0A1B0GWJ7 208 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 CNTFRP26992 372 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 TAS2R60P59551 318 aa11.75□□□□□ -0.53
TCOF1-202ENST00000377797 C15orf32Q32M92 178 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 SAPCD1Q5SSQ6 148 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 NPFFR1Q9GZQ6 430 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 SH2D7A6NKC9 451 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-202ENST00000377797 GGCTO75223 188 aaKnown RBP11.74□□□□□ -0.53
TCOF1-202ENST00000377797 CBLN1P23435 193 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 CRIP3Q6Q6R5 217 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 A0A1B0GV90 55 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 VDAC2P45880 294 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-202ENST00000377797 NAV2Q8IVL1 2488 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 TWIST1Q15672 202 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 C8orf46Q8TAG6 207 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 GPR82Q96P67 336 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 GPR61Q9BZJ8 451 aa11.74□□□□□ -0.53
TCOF1-202ENST00000377797 C22orf46C9J442 243 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 TUBA4BQ9H853 241 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 TRAV41A0A0B4J266 112 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 OCC1Q8TAD7 63 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 NDUFS8O00217 210 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 OR5AL1P0C617 328 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 SPSB3Q6PJ21 355 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 PARD6GQ9BYG4 376 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-202ENST00000377797 YAE1D1Q9NRH1 226 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 SRRM4A7MD48 611 aaKnown RBP11.73□□□□□ -0.53
TCOF1-202ENST00000377797 RNF224P0DH78 156 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 ZNF124Q15973 351 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 NDUFA4L2Q9NRX3 87 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 IL36BQ9NZH7 164 aa11.73□□□□□ -0.53
TCOF1-202ENST00000377797 A0A1B0GW64 132 aa11.72□□□□□ -0.53
TCOF1-202ENST00000377797 UBE2E1P51965 193 aa11.72□□□□□ -0.53
TCOF1-202ENST00000377797 TRGV9Q99603 122 aa11.72□□□□□ -0.53
TCOF1-202ENST00000377797 EPDR1Q9UM22 224 aa11.72□□□□□ -0.53
TCOF1-202ENST00000377797 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-202ENST00000377797 C22orf34Q6ZV56 151 aa11.72□□□□□ -0.53
TCOF1-202ENST00000377797 PRSS22Q9GZN4 317 aa11.72□□□□□ -0.53
TCOF1-202ENST00000377797 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-202ENST00000377797 GOLT1BQ9Y3E0 138 aa11.72□□□□□ -0.53
TCOF1-202ENST00000377797 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
TCOF1-202ENST00000377797 IGHV2-70P01814 119 aa11.71□□□□□ -0.53
TCOF1-202ENST00000377797 RPLP1P05386 114 aaKnown RBP11.71□□□□□ -0.53
TCOF1-202ENST00000377797 ELOBQ15370 118 aa11.71□□□□□ -0.53
TCOF1-202ENST00000377797 RNASE7Q9H1E1 156 aaKnown RBP11.71□□□□□ -0.53
TCOF1-202ENST00000377797 MGPP08493 103 aa11.71□□□□□ -0.53
TCOF1-202ENST00000377797 SLC25A16P16260 332 aa11.71□□□□□ -0.53
TCOF1-202ENST00000377797 ATG101Q9BSB4 218 aa11.71□□□□□ -0.53
TCOF1-202ENST00000377797 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
TCOF1-202ENST00000377797 PAM16Q9Y3D7 125 aa11.71□□□□□ -0.53
TCOF1-202ENST00000377797 TNCP24821 2201 aa11.71□□□□□ -0.53
TCOF1-202ENST00000377797 GRIFINA4D1Z8 144 aa11.71□□□□□ -0.54
TCOF1-202ENST00000377797 C9JQL5 133 aa11.71□□□□□ -0.54
TCOF1-202ENST00000377797 GPX1P07203 203 aa11.71□□□□□ -0.54
TCOF1-202ENST00000377797 MSMBP08118 114 aa11.71□□□□□ -0.54
TCOF1-202ENST00000377797 SRIP30626 198 aa11.71□□□□□ -0.54
TCOF1-202ENST00000377797 ZNF562Q6V9R5 426 aa11.71□□□□□ -0.54
TCOF1-202ENST00000377797 HAPLN4Q86UW8 402 aa11.71□□□□□ -0.54
TCOF1-202ENST00000377797 SCRT1Q9BWW7 348 aa11.71□□□□□ -0.54
TCOF1-202ENST00000377797 TPSG1Q9NRR2 321 aa11.71□□□□□ -0.54
TCOF1-202ENST00000377797 GCGP01275 180 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 ARL6IP6Q8N6S5 226 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
TCOF1-202ENST00000377797 IGHV2-70DA0A0C4DH43 119 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 MAPK1IP1LQ8NDC0 245 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 PMS2P5A8MQ11 134 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 FNDC10F2Z333 226 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 RUSC1-AS1Q66K80 236 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 DMRTC2Q8IXT2 367 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-202ENST00000377797 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 DERL1Q9BUN8 251 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 IGKV3-20P01619 116 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 NEU1Q99519 415 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 ELOVL1Q9BW60 279 aa11.7□□□□□ -0.54
TCOF1-202ENST00000377797 RPS20P60866 119 aaKnown RBP11.69□□□□□ -0.54
TCOF1-202ENST00000377797 PRRC2CQ9Y520 2896 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms